Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4080

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
4,862,168	+		Psyr_4078	0.80	+3.7
4,862,224	-		Psyr_4078	0.83	-0.9
4,862,265	+		Psyr_4078	0.86	+2.4
4,862,266	-		Psyr_4078	0.86	-0.9
4,862,316	+		Psyr_4078	0.89	+0.1
4,862,425	+				+0.9
4,862,425	+				+2.1
4,862,426	-				-2.5
4,862,426	-				-0.3
4,862,426	-				+1.3
4,862,609	-		Psyr_4079	0.30	+0.2
4,862,609	-		Psyr_4079	0.30	-1.6
4,862,609	-		Psyr_4079	0.30	+2.0
4,862,713	+		Psyr_4079	0.61	-0.9
4,862,714	-		Psyr_4079	0.62	-1.5
4,862,727	-		Psyr_4079	0.65	-0.9
4,862,753	+		Psyr_4079	0.73	+1.3
4,862,753	+		Psyr_4079	0.73	-1.8
4,862,753	+		Psyr_4079	0.73	-0.0
4,862,753	+		Psyr_4079	0.73	+2.8
4,862,753	+		Psyr_4079	0.73	-2.2
4,862,753	+				+1.1
4,862,753	+		Psyr_4079	0.73	+0.9
4,862,753	+		Psyr_4079	0.73	+1.6
4,862,753	+		Psyr_4079	0.73	+1.3
4,862,753	+		Psyr_4079	0.73	+1.1
4,862,754	-		Psyr_4079	0.74	-0.1
4,862,754	-		Psyr_4079	0.74	-0.2
4,862,754	-		Psyr_4079	0.74	+0.5
4,862,754	-		Psyr_4079	0.74	+1.7
4,862,754	-		Psyr_4079	0.74	+2.0
4,862,754	-		Psyr_4079	0.74	-1.3
4,862,754	-		Psyr_4079	0.74	-1.7
4,862,754	-		Psyr_4079	0.74	+0.9
4,862,754	-		Psyr_4079	0.74	-1.7
4,862,754	-		Psyr_4079	0.74	-0.7
4,862,757	+		Psyr_4079	0.74	+1.1
4,862,757	+		Psyr_4079	0.74	+1.1
4,862,757	+		Psyr_4079	0.74	+1.1
4,862,757	+		Psyr_4079	0.74	+0.3
4,862,757	+		Psyr_4079	0.74	-1.1
4,862,757	+		Psyr_4079	0.74	+2.1
4,862,758	-		Psyr_4079	0.75	+0.3
4,862,758	-		Psyr_4079	0.75	+2.1
4,862,758	-		Psyr_4079	0.75	-0.2
4,862,758	-		Psyr_4079	0.75	+1.0
4,862,758	-		Psyr_4079	0.75	-3.0
4,862,758	-		Psyr_4079	0.75	-0.3
4,862,758	-		Psyr_4079	0.75	+3.7
4,862,758	-		Psyr_4079	0.75	+0.1
4,862,758	-		Psyr_4079	0.75	+1.0
4,862,809	-				-0.5
4,862,815	-				-1.0
4,862,826	+				-1.9
4,862,826	+				+1.0
4,862,826	+				+1.2
4,862,826	+				+1.5
4,862,826	+				-1.4
4,862,827	-				-1.5
4,862,827	-				+0.9
4,862,827	-				+1.1
4,862,827	-				+1.7
4,862,828	+				+0.3
4,862,828	+				-2.3
4,862,828	+				-0.2
4,862,828	+				-0.7
4,862,828	+				+0.1
4,862,828	+				+1.6
4,862,828	+				-1.7
4,862,828	+				-0.4
4,862,828	+				+1.0
4,862,828	+				-0.5
4,862,828	+				+3.6
4,862,829	-				-0.1
4,862,829	-				+0.1
4,862,829	-				+0.7
4,862,829	-				+0.8
4,862,829	-				-1.5
4,862,829	-				-1.3
4,862,829	-				+1.3
4,862,829	-				+3.1
4,862,829	-				-0.0
4,862,829	-				-0.5
4,862,889	+				-3.3
4,862,890	-				+1.1
4,862,891	+				+1.5
4,862,891	+				-0.0
4,862,891	+				+0.0
4,862,891	+				-0.1
4,862,891	+				+0.9
4,862,891	+				+2.2
4,862,891	+				-0.8
4,862,891	+				-1.3
4,862,891	+				-3.0
4,862,891	+				-0.8
4,862,892	-				+1.8
4,862,892	-				-0.6
4,862,892	-				+0.9
4,862,892	-				-1.3
4,862,892	-				-1.2
4,862,892	-				+0.1
4,862,892	-				-2.9
4,862,892	-				-0.6
4,862,892	-				-0.5
4,862,907	+				-0.2
4,862,965	-				+0.1
4,863,002	+				-0.6
4,863,002	+				+0.4
4,863,003	-				+0.5
4,863,003	-				+0.1
4,863,003	-				-0.5
4,863,003	-				+0.4
4,863,023	+				-0.5
4,863,024	-				-1.6
4,863,054	+				-0.1
4,863,080	+				-2.2
4,863,081	-				-0.7
4,863,081	-				-0.8
4,863,081	-				+1.9
4,863,083	-				-0.1
4,863,083	-				-1.8
4,863,083	-				+0.6
4,863,083	-				+0.4
4,863,083	-				-0.7
4,863,083	-				+0.3
4,863,100	+				+0.4
4,863,100	+				-1.3
4,863,100	+				+2.1
4,863,100	+				+0.5
4,863,100	+				+0.2
4,863,100	+				-0.1
4,863,101	-				+1.1
4,863,101	-				+0.7
4,863,101	-				+0.3
4,863,101	-				-1.1
4,863,101	-				+1.1
4,863,103	-				+1.1
4,863,137	+				-1.5
4,863,138	-				+0.3
4,863,139	+				-0.5
4,863,139	+				-0.6
4,863,139	+				-0.1
4,863,139	+				-2.3
4,863,139	+				+0.4
4,863,140	-				+0.5
4,863,140	-				+0.3
4,863,140	-				-1.0
4,863,140	-				-1.9
4,863,140	-				-0.5
4,863,141	+				+1.7
4,863,142	-				+0.6
4,863,142	-				-0.5
4,863,158	+				+1.2
4,863,159	-				+0.4
4,863,167	+				+0.2
4,863,365	+				-0.9
4,863,365	+				+1.9
4,863,366	-				-0.7
4,863,366	-				-1.3
4,863,392	-				+1.8
4,863,392	-				+1.2
4,863,403	+				+0.8
4,863,403	+				+1.2
4,863,403	+				-0.1
4,863,403	+				-0.2
4,863,403	+				-1.9
4,863,403	+				+0.6
4,863,404	-				+0.4
4,863,404	-				+0.3
4,863,404	-				+0.2
4,863,404	-				+1.0
4,863,404	-				+1.0
4,863,404	-				+0.7
4,863,405	+				+2.3
4,863,405	+				-1.1
4,863,405	+				-0.6
4,863,451	+		Psyr_4080	0.12	+1.2
4,863,509	+		Psyr_4080	0.14	+0.2
4,863,509	+		Psyr_4080	0.14	+0.5
4,863,510	-		Psyr_4080	0.14	+0.7
4,863,510	-		Psyr_4080	0.14	-0.4
4,863,549	-		Psyr_4080	0.15	-0.4
4,863,549	-		Psyr_4080	0.15	-0.9
4,863,559	+		Psyr_4080	0.16	-0.8
4,863,616	+		Psyr_4080	0.18	+0.8
4,863,616	+		Psyr_4080	0.18	-0.7
4,863,616	+		Psyr_4080	0.18	-1.2
4,863,616	+		Psyr_4080	0.18	-0.6
4,863,616	+		Psyr_4080	0.18	+0.4
4,863,616	+		Psyr_4080	0.18	-0.9
4,863,616	+		Psyr_4080	0.18	-2.3
4,863,616	+		Psyr_4080	0.18	-3.4
4,863,616	+		Psyr_4080	0.18	-0.6
4,863,616	+		Psyr_4080	0.18	-0.2
4,863,616	+		Psyr_4080	0.18	-0.8
4,863,616	+		Psyr_4080	0.18	+2.4
4,863,616	+		Psyr_4080	0.18	+0.2
4,863,616	+		Psyr_4080	0.18	+0.9
4,863,616	+		Psyr_4080	0.18	+0.7
4,863,616	+		Psyr_4080	0.18	+1.6
4,863,616	+		Psyr_4080	0.18	+0.2
4,863,616	+		Psyr_4080	0.18	+1.1
4,863,616	+		Psyr_4080	0.18	-1.1
4,863,617	-		Psyr_4080	0.18	-0.4
4,863,617	-		Psyr_4080	0.18	-0.5
4,863,617	-		Psyr_4080	0.18	+0.5
4,863,617	-		Psyr_4080	0.18	+1.6
4,863,617	-		Psyr_4080	0.18	+0.0
4,863,617	-		Psyr_4080	0.18	-1.7
4,863,617	-		Psyr_4080	0.18	-0.5
4,863,617	-		Psyr_4080	0.18	+1.7
4,863,617	-		Psyr_4080	0.18	+0.9
4,863,617	-		Psyr_4080	0.18	+0.9
4,863,617	-		Psyr_4080	0.18	+1.1
4,863,653	+		Psyr_4080	0.19	-0.6
4,863,654	-		Psyr_4080	0.20	-1.1
4,863,654	-		Psyr_4080	0.20	+1.3
4,863,654	-		Psyr_4080	0.20	+0.9
4,863,688	+		Psyr_4080	0.21	+0.3
4,863,688	+		Psyr_4080	0.21	-0.7
4,863,688	+		Psyr_4080	0.21	+0.7
4,863,688	+		Psyr_4080	0.21	-0.2
4,863,689	-		Psyr_4080	0.21	+2.7
4,863,689	-		Psyr_4080	0.21	-0.2
4,863,689	-		Psyr_4080	0.21	-0.2
4,863,689	-		Psyr_4080	0.21	+2.0
4,863,877	+		Psyr_4080	0.28	-0.4
4,863,878	-		Psyr_4080	0.28	-0.2
4,863,946	+		Psyr_4080	0.31	-0.3
4,863,947	-		Psyr_4080	0.31	+1.7
4,863,947	-		Psyr_4080	0.31	+0.5
4,863,955	+		Psyr_4080	0.31	-0.6
4,863,955	+		Psyr_4080	0.31	+0.0
4,863,955	+		Psyr_4080	0.31	+0.8
4,863,956	-		Psyr_4080	0.31	-0.4
4,863,956	-		Psyr_4080	0.31	-0.3
4,863,956	-		Psyr_4080	0.31	+0.8
4,863,956	-		Psyr_4080	0.31	-0.9
4,863,973	+		Psyr_4080	0.32	-0.4
4,863,974	-		Psyr_4080	0.32	-0.5
4,864,010	+		Psyr_4080	0.33	-0.7
4,864,011	-		Psyr_4080	0.33	-0.1
4,864,011	-		Psyr_4080	0.33	+1.7
4,864,065	+		Psyr_4080	0.36	+2.4
4,864,065	+		Psyr_4080	0.36	+0.4
4,864,066	-		Psyr_4080	0.36	+1.8
4,864,066	-		Psyr_4080	0.36	-0.2
4,864,066	-		Psyr_4080	0.36	-0.9
4,864,081	+		Psyr_4080	0.36	+1.9
4,864,082	-		Psyr_4080	0.36	+1.5
4,864,189	+		Psyr_4080	0.40	-0.1
4,864,189	+		Psyr_4080	0.40	+0.6
4,864,189	+		Psyr_4080	0.40	+0.7
4,864,189	+		Psyr_4080	0.40	+2.4
4,864,189	+		Psyr_4080	0.40	+0.1
4,864,189	+		Psyr_4080	0.40	-0.1
4,864,189	+		Psyr_4080	0.40	-0.6
4,864,190	-		Psyr_4080	0.40	+0.9
4,864,190	-		Psyr_4080	0.40	+0.3
4,864,190	-		Psyr_4080	0.40	-0.1
4,864,190	-		Psyr_4080	0.40	-1.3
4,864,540	+		Psyr_4080	0.54	+0.1
4,864,540	+		Psyr_4080	0.54	+0.2
4,864,540	+		Psyr_4080	0.54	-0.9
4,864,540	+		Psyr_4080	0.54	-2.5
4,864,540	+		Psyr_4080	0.54	-0.3
4,864,540	+		Psyr_4080	0.54	+0.0
4,864,541	-		Psyr_4080	0.54	-0.3
4,864,541	-		Psyr_4080	0.54	-0.1
4,864,541	-		Psyr_4080	0.54	+0.5
4,864,541	-		Psyr_4080	0.54	-0.3
4,864,541	-		Psyr_4080	0.54	+0.7
4,864,541	-		Psyr_4080	0.54	+0.4
4,864,541	-		Psyr_4080	0.54	+1.5
4,864,541	-		Psyr_4080	0.54	-2.9
4,864,542	+		Psyr_4080	0.54	+0.6
4,864,551	+		Psyr_4080	0.55	+0.0
4,864,551	+		Psyr_4080	0.55	+0.3
4,864,551	+		Psyr_4080	0.55	-0.4
4,864,551	+		Psyr_4080	0.55	-0.4
4,864,552	-		Psyr_4080	0.55	+0.5
4,864,552	-		Psyr_4080	0.55	+0.0
4,864,552	-		Psyr_4080	0.55	-0.5
4,864,844	-		Psyr_4080	0.66	-1.9
4,864,844	-		Psyr_4080	0.66	+0.1
4,864,844	-		Psyr_4080	0.66	+0.6
4,864,844	-		Psyr_4080	0.66	+0.1
4,864,980	+		Psyr_4080	0.71	-0.9
4,864,980	+		Psyr_4080	0.71	+1.1
4,864,980	+		Psyr_4080	0.71	+1.7
4,864,980	+		Psyr_4080	0.71	+1.1
4,865,066	+		Psyr_4080	0.75	-0.1
4,865,067	-		Psyr_4080	0.75	-0.6
4,865,067	-		Psyr_4080	0.75	+4.3
4,865,107	+		Psyr_4080	0.76	+0.6
4,865,107	+		Psyr_4080	0.76	+0.8
4,865,108	-		Psyr_4080	0.76	+2.4
4,865,108	-		Psyr_4080	0.76	-1.7
4,865,374	+		Psyr_4080	0.87	+0.8
4,865,374	+		Psyr_4080	0.87	+0.3
4,865,374	+		Psyr_4080	0.87	-0.1
4,865,374	+		Psyr_4080	0.87	+0.9
4,865,374	+		Psyr_4080	0.87	+0.4
4,865,374	+		Psyr_4080	0.87	-0.7
4,865,375	-		Psyr_4080	0.87	+1.1
4,865,375	-		Psyr_4080	0.87	+1.1
4,865,375	-		Psyr_4080	0.87	+1.1
4,865,375	-		Psyr_4080	0.87	-0.6
4,865,375	-		Psyr_4080	0.87	-0.6
4,865,375	-		Psyr_4080	0.87	-1.3
4,865,572	+				+0.8
4,865,572	+				-0.3
4,865,573	-				-1.0
4,865,573	-				+1.1
4,865,672	+				+1.1
4,865,730	+				+1.9
4,865,730	+				-3.1
4,865,731	-				-0.1
4,865,856	+				+1.1
4,865,856	+				-0.7
4,865,857	-				+0.7
4,865,857	-				+0.4
4,865,857	-				+0.1
4,865,857	-				+1.5
4,865,857	-				-0.0
4,865,857	-				+0.3
4,865,857	-				-0.0
4,865,891	-				+1.5
4,865,953	+		Psyr_4081	0.12	+0.0
4,865,954	-		Psyr_4081	0.12	+0.4
4,866,018	+		Psyr_4081	0.15	-0.2
4,866,018	+		Psyr_4081	0.15	+0.0
4,866,018	+		Psyr_4081	0.15	-1.3
4,866,018	+		Psyr_4081	0.15	+0.8
4,866,018	+		Psyr_4081	0.15	-0.1
4,866,018	+		Psyr_4081	0.15	+0.8
4,866,018	+		Psyr_4081	0.15	-0.8
4,866,018	+		Psyr_4081	0.15	-1.1
4,866,018	+		Psyr_4081	0.15	+2.9
4,866,018	+		Psyr_4081	0.15	-0.5
4,866,018	+		Psyr_4081	0.15	-0.7
4,866,018	+		Psyr_4081	0.15	-2.0
4,866,019	-		Psyr_4081	0.15	-0.5
4,866,019	-		Psyr_4081	0.15	+0.2
4,866,019	-		Psyr_4081	0.15	-1.2
4,866,019	-		Psyr_4081	0.15	+0.4
4,866,019	-		Psyr_4081	0.15	-0.2
4,866,019	-		Psyr_4081	0.15	-0.3
4,866,019	-		Psyr_4081	0.15	-0.2
4,866,019	-		Psyr_4081	0.15	-0.6
4,866,019	-		Psyr_4081	0.15	-0.0
4,866,160	+		Psyr_4081	0.22	-0.6
4,866,160	+		Psyr_4081	0.22	-1.7
4,866,160	+		Psyr_4081	0.22	+0.6
4,866,160	+		Psyr_4081	0.22	+0.5
4,866,160	+		Psyr_4081	0.22	-1.5
4,866,160	+		Psyr_4081	0.22	-0.6
4,866,160	+		Psyr_4081	0.22	+1.1
4,866,161	-		Psyr_4081	0.22	-0.2
4,866,161	-		Psyr_4081	0.22	+0.4
4,866,161	-		Psyr_4081	0.22	+0.3
4,866,161	-		Psyr_4081	0.22	+1.0
4,866,161	-		Psyr_4081	0.22	-1.2
4,866,204	+		Psyr_4081	0.24	-0.2
4,866,224	+		Psyr_4081	0.25	+1.2
4,866,240	+		Psyr_4081	0.26	-1.8
4,866,240	+		Psyr_4081	0.26	-1.9
4,866,240	+		Psyr_4081	0.26	-2.0
4,866,240	+		Psyr_4081	0.26	+1.0
4,866,240	+		Psyr_4081	0.26	-0.6
4,866,241	-		Psyr_4081	0.26	-0.1
4,866,241	-		Psyr_4081	0.26	+1.4
4,866,241	-		Psyr_4081	0.26	-0.3
4,866,333	+		Psyr_4081	0.30	-0.0
4,866,333	+		Psyr_4081	0.30	-2.6
4,866,336	+		Psyr_4081	0.31	+0.1
4,866,336	+		Psyr_4081	0.31	+2.3
4,866,336	+		Psyr_4081	0.31	-0.5
4,866,336	+		Psyr_4081	0.31	+1.2
4,866,336	+		Psyr_4081	0.31	-0.2
4,866,336	+		Psyr_4081	0.31	+0.3
4,866,336	+		Psyr_4081	0.31	+0.0
4,866,337	-		Psyr_4081	0.31	-0.1
4,866,337	-		Psyr_4081	0.31	-1.0
4,866,337	-		Psyr_4081	0.31	-0.6
4,866,337	-		Psyr_4081	0.31	+0.4
4,866,379	+		Psyr_4081	0.33	+0.1
4,866,380	-		Psyr_4081	0.33	+2.9
4,866,380	-		Psyr_4081	0.33	-1.8
4,866,589	+		Psyr_4081	0.43	+1.4
4,866,645	+		Psyr_4081	0.46	-1.0
4,866,646	-		Psyr_4081	0.46	-0.3
4,866,677	+		Psyr_4081	0.47	+1.0
4,866,677	+		Psyr_4081	0.47	+0.1
4,866,678	-		Psyr_4081	0.47	-1.4
4,866,686	+		Psyr_4081	0.48	-1.5
4,866,686	+		Psyr_4081	0.48	-0.4
4,866,708	-		Psyr_4081	0.49	+0.0