Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3791

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
4,505,877	+				-0.3
4,505,878	-				+1.3
4,506,048	+				+0.1
4,506,048	+				-0.6
4,506,048	+				-0.2
4,506,048	+				+0.3
4,506,048	+				+1.3
4,506,048	+				+0.6
4,506,048	+				+0.6
4,506,048	+				+0.2
4,506,048	+				+3.9
4,506,048	+				+2.7
4,506,048	+				+3.7
4,506,048	+				-1.8
4,506,048	+				-0.9
4,506,048	+				+0.2
4,506,048	+				+0.0
4,506,048	+				-0.2
4,506,049	-				+0.5
4,506,049	-				+0.4
4,506,049	-				-1.4
4,506,049	-				+0.1
4,506,049	-				-1.7
4,506,049	-				-0.3
4,506,049	-				+0.4
4,506,049	-				+1.3
4,506,049	-				-0.2
4,506,049	-				-0.5
4,506,049	-				-1.1
4,506,049	-				-1.3
4,506,049	-				+1.1
4,506,054	+				+0.4
4,506,204	+				+0.5
4,506,204	+				+0.8
4,506,204	+				-1.5
4,506,204	+				+0.3
4,506,204	+				-0.6
4,506,204	+				-0.0
4,506,204	+				+0.7
4,506,204	+				-2.4
4,506,205	-				+0.8
4,506,205	-				+0.1
4,506,205	-				-1.0
4,506,205	-				-0.2
4,506,210	+				+0.1
4,506,295	-				-1.9
4,506,295	-				+0.9
4,506,324	-				+1.3
4,506,324	-				+1.4
4,506,476	+		Psyr_3790	0.51	+0.4
4,506,476	+		Psyr_3790	0.51	-0.6
4,506,476	+		Psyr_3790	0.51	+0.3
4,506,476	+		Psyr_3790	0.51	+0.0
4,506,476	+		Psyr_3790	0.51	-0.3
4,506,476	+		Psyr_3790	0.51	+0.6
4,506,477	-		Psyr_3790	0.51	+0.6
4,506,477	-		Psyr_3790	0.51	-0.8
4,506,477	-		Psyr_3790	0.51	+2.4
4,506,477	-		Psyr_3790	0.51	-1.7
4,506,477	-		Psyr_3790	0.51	+0.9
4,506,521	+		Psyr_3790	0.66	+0.3
4,506,521	+		Psyr_3790	0.66	+0.9
4,506,522	-		Psyr_3790	0.66	+0.1
4,506,617	+				+0.3
4,506,617	+				-2.0
4,506,617	+				-1.5
4,506,617	+				+0.2
4,506,618	-				-0.2
4,506,618	-				+0.7
4,506,628	+				-1.7
4,506,628	+				-0.7
4,506,628	+				-0.2
4,506,628	+				-0.7
4,506,628	+				+1.1
4,506,628	+				-0.5
4,506,628	+				+3.1
4,506,629	-				-1.4
4,506,629	-				+0.8
4,506,629	-				+0.3
4,506,629	-				+0.0
4,506,630	+				+1.5
4,506,630	+				-0.3
4,506,630	+				-2.0
4,506,631	-				-1.0
4,506,631	-				-1.3
4,506,631	-				-0.7
4,506,631	-				+0.1
4,506,631	-				+0.7
4,506,631	-				-1.4
4,506,631	-				-0.2
4,506,631	-				+1.1
4,506,742	+				-2.6
4,506,759	+				+1.2
4,506,759	+				+0.5
4,506,764	+				-0.6
4,506,764	+				+1.0
4,506,765	-				-2.0
4,506,765	-				-2.0
4,506,765	-				-2.0
4,506,765	-				+0.5
4,506,765	-				+2.7
4,507,065	+		Psyr_3791	0.19	-1.7
4,507,167	+		Psyr_3791	0.27	-1.3
4,507,168	-		Psyr_3791	0.27	-0.8
4,507,168	-		Psyr_3791	0.27	-1.5
4,507,168	-		Psyr_3791	0.27	+1.1
4,507,344	+		Psyr_3791	0.40	-1.5
4,507,356	-		Psyr_3791	0.41	-1.7
4,507,406	-		Psyr_3791	0.45	-1.5
4,507,420	-		Psyr_3791	0.46	+0.3
4,507,420	-		Psyr_3791	0.46	+0.1
4,508,078	-				-3.7
4,508,092	+				-0.0
4,508,153	+				+1.1
4,508,154	-				-1.5
4,508,174	+				+3.4
4,508,174	+				+0.0
4,508,175	-				+1.1
4,508,175	-				+0.4
4,508,184	+				-1.0
4,508,184	+				-1.0
4,508,184	+				+0.0
4,508,345	-				-0.9
4,508,345	-				+0.3
4,508,614	-		Psyr_3792	0.25	+1.1
4,508,929	+		Psyr_3792	0.51	+0.5
4,508,929	+		Psyr_3792	0.51	-0.5
4,508,929	+		Psyr_3792	0.51	-0.9
4,508,929	+		Psyr_3792	0.51	+1.0
4,508,929	+		Psyr_3792	0.51	+0.3
4,508,930	-		Psyr_3792	0.51	+0.1
4,509,044	+		Psyr_3792	0.60	-0.8
4,509,045	-		Psyr_3792	0.60	-0.9
4,509,117	+		Psyr_3792	0.66	+0.7
4,509,118	-		Psyr_3792	0.66	-1.4
4,509,118	-		Psyr_3792	0.66	+0.2
4,509,118	-		Psyr_3792	0.66	-0.5
4,509,118	-		Psyr_3792	0.66	+0.5