Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3667

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
4,353,581	-				+0.3
4,353,581	-				+1.1
4,353,628	+				-2.8
4,353,667	-				-1.0
4,353,737	-				-1.6
4,353,766	-				-0.5
4,353,769	-				+0.9
4,353,833	+				+1.6
4,353,924	+				-1.4
4,353,925	-				-0.0
4,353,938	-				-0.1
4,354,039	+				-0.4
4,354,039	+				-1.7
4,354,039	+				-2.1
4,354,039	+				+1.4
4,354,039	+				+1.4
4,354,040	-				-1.4
4,354,040	-				+1.1
4,354,040	-				-0.8
4,354,040	-				+1.1
4,354,040	-				-0.3
4,354,076	+				-2.2
4,354,076	+				+1.7
4,354,139	+				+2.1
4,354,139	+				+2.1
4,354,140	-				-1.2
4,354,140	-				-0.4
4,354,140	-				+0.9
4,354,218	+				-0.7
4,354,219	-				-0.1
4,354,223	+				-2.5
4,354,223	+				+0.0
4,354,223	+				-0.3
4,354,224	-				+0.1
4,354,350	+		Psyr_3667	0.33	-1.6
4,354,415	+		Psyr_3667	0.55	-1.0
4,354,415	+		Psyr_3667	0.55	+0.5
4,354,473	-		Psyr_3667	0.74	-1.7
4,354,473	-		Psyr_3667	0.74	-1.1
4,354,523	-				-0.3
4,354,596	-				+0.9
4,354,596	-				+1.3
4,354,598	+				+1.3
4,354,824	-				+0.1
4,354,858	+				-1.2
4,354,858	+				+0.5
4,354,858	+				+0.0
4,354,858	+				-1.5
4,354,858	+				+1.1
4,354,858	+				-0.1
4,354,859	-				+0.4
4,354,859	-				+0.3
4,354,859	-				+0.3
4,354,859	-				-1.1
4,354,859	-				+2.7
4,354,859	-				+0.8
4,354,862	+				+0.8
4,354,862	+				+1.2
4,354,862	+				+0.5
4,354,863	-				-1.1
4,354,863	-				+0.3
4,354,887	+				+0.1
4,354,954	+				-1.5
4,354,954	+				-0.1
4,354,987	+				-0.0
4,355,034	+				+1.4
4,355,034	+				+1.1
4,355,035	-				+2.7
4,355,035	-				-0.1
4,355,041	-				+1.6
4,355,192	-		Psyr_3668	0.72	-1.0
4,355,310	-				+0.3
4,355,320	+				-0.3
4,355,321	-				+0.8
4,355,321	-				-1.4
4,355,322	+				-2.0
4,355,335	-				-0.7
4,355,377	+				+0.5
4,355,399	+				-1.6
4,355,408	-				+1.7
4,355,408	-				-0.3
4,355,413	+				+1.3
4,355,413	+				+0.8
4,355,433	-				+1.8
4,355,457	+				-1.7
4,355,458	-				+1.8
4,355,488	+				-0.5
4,355,488	+				-1.2
4,355,488	+				+0.8
4,355,488	+				+1.1
4,355,488	+				+0.2
4,355,489	-				-0.0
4,355,489	-				-1.5
4,355,492	-				+0.2
4,355,500	+				+1.1
4,355,501	-				+0.2