Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3555

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
4,232,796	-		Psyr_3553	0.84	+2.4
4,232,801	+		Psyr_3553	0.85	+0.1
4,232,801	+		Psyr_3553	0.85	+0.1
4,232,802	-		Psyr_3553	0.86	+0.7
4,232,802	-		Psyr_3553	0.86	-0.4
4,232,802	-		Psyr_3553	0.86	+2.7
4,232,802	-		Psyr_3553	0.86	+0.3
4,232,802	-		Psyr_3553	0.86	-0.1
4,232,916	-				+4.9
4,232,916	-				+0.1
4,232,916	-				-1.3
4,232,916	-				-0.3
4,232,967	+		Psyr_RNA54	0.65	-0.7
4,232,986	-				+0.3
4,233,050	-				-0.1
4,233,058	-				-0.8
4,233,078	-				+0.1
4,233,078	-				+0.1
4,233,261	-				-0.4
4,233,261	-				-1.3
4,233,265	-				-0.4
4,233,265	-				-0.5
4,233,464	-		Psyr_3554	0.23	+0.3
4,233,513	-		Psyr_3554	0.49	+0.2
4,233,608	+				-1.2
4,233,609	-				-1.2
4,233,609	-				+1.2
4,233,609	-				+0.2
4,233,653	+				-2.7
4,233,653	+				-0.6
4,233,653	+				+0.1
4,233,653	+				-1.4
4,233,654	-				-0.3
4,233,654	-				+0.6
4,233,654	-				+1.8
4,233,654	-				-0.3
4,233,654	-				-0.3
4,233,654	-				-1.4
4,233,654	-				-1.0
4,233,688	+				+1.4
4,233,689	-				+0.6
4,233,694	+				-1.8
4,233,694	+				-1.2
4,233,694	+				-0.1
4,233,694	+				+0.4
4,233,695	-				+0.3
4,233,695	-				-0.6
4,233,695	-				+1.3
4,233,695	-				+1.7
4,233,695	-				+0.3
4,233,695	-				+3.2
4,233,695	-				-0.3
4,234,291	-		Psyr_3555	0.42	+1.3
4,234,291	-		Psyr_3555	0.42	-0.2
4,234,291	-		Psyr_3555	0.42	-0.6
4,234,291	-		Psyr_3555	0.42	+1.4
4,235,048	-				-0.3