Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3448

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
4,110,023	+				-0.6
4,110,024	-				+0.4
4,110,024	-				-1.3
4,110,024	-				-2.3
4,110,077	+				-1.5
4,110,377	+		Psyr_3447	0.39	-1.7
4,110,435	+		Psyr_3447	0.45	-0.7
4,110,678	+		Psyr_3447	0.70	-0.6
4,110,679	-		Psyr_3447	0.70	+1.3
4,110,693	+		Psyr_3447	0.72	-2.8
4,110,693	+		Psyr_3447	0.72	+0.4
4,110,693	+		Psyr_3447	0.72	-1.0
4,110,693	+		Psyr_3447	0.72	+1.5
4,110,694	-		Psyr_3447	0.72	+0.4
4,110,694	-		Psyr_3447	0.72	+0.3
4,110,694	-		Psyr_3447	0.72	-1.9
4,110,694	-		Psyr_3447	0.72	+0.6
4,111,166	+		Psyr_3448	0.37	+0.5
4,111,167	-		Psyr_3448	0.37	+2.4
4,111,167	-		Psyr_3448	0.37	+0.2
4,111,167	-		Psyr_3448	0.37	+0.1
4,111,167	-		Psyr_3448	0.37	+0.5
4,111,167	-		Psyr_3448	0.37	+0.5
4,111,210	+		Psyr_3448	0.45	-0.9
4,111,211	-		Psyr_3448	0.46	-0.8
4,111,213	+		Psyr_3448	0.46	-2.5
4,111,213	+		Psyr_3448	0.46	-1.5
4,111,214	-		Psyr_3448	0.46	+0.9
4,111,227	+		Psyr_3448	0.49	+1.9
4,111,227	+		Psyr_3448	0.49	-0.2
4,111,227	+		Psyr_3448	0.49	+0.5
4,111,227	+		Psyr_3448	0.49	-0.9
4,111,227	+		Psyr_3448	0.49	+1.7
4,111,227	+		Psyr_3448	0.49	+1.3
4,111,228	-		Psyr_3448	0.49	+2.7
4,111,228	-		Psyr_3448	0.49	+1.3
4,111,334	+		Psyr_3448	0.70	+2.1
4,111,335	-		Psyr_3448	0.70	+0.2
4,111,335	-		Psyr_3448	0.70	+0.1
4,111,389	-		Psyr_3448	0.80	+1.2
4,111,421	-		Psyr_3448	0.87	+0.4
4,111,442	-				-0.5
4,111,469	-				+3.1
4,111,525	+				-0.5
4,111,525	+				+0.1
4,111,526	-				+1.7
4,111,550	+				+0.1
4,111,550	+				+0.2
4,111,564	-				-1.4
4,111,564	-				+0.7
4,111,579	-				-0.5
4,111,848	-				+1.1
4,111,848	-				-0.7
4,112,076	-				-0.6
4,112,076	-				-0.9
4,112,076	-				+1.5
4,112,076	-				-0.6
4,112,117	-				-1.4
4,112,117	-				+0.5
4,112,236	-				-1.8
4,112,316	+				+0.5
4,112,316	+				+2.2
4,112,316	+				-0.0
4,112,316	+				-1.9
4,112,316	+				+1.1
4,112,316	+				-0.9
4,112,434	-				-2.1
4,112,457	-				-1.4