Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3156

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
3,780,974	+		Psyr_3154	0.80	-1.0
3,780,976	+		Psyr_3154	0.81	-0.1
3,780,976	+		Psyr_3154	0.81	-1.4
3,780,976	+		Psyr_3154	0.81	+0.7
3,781,100	+				-1.8
3,781,101	-				+0.8
3,781,101	-				-0.6
3,781,133	-				-3.2
3,781,193	+				-1.5
3,781,194	-				-0.9
3,781,194	-				+0.1
3,781,485	+		Psyr_3155	0.50	+0.5
3,781,485	+		Psyr_3155	0.50	+1.7
3,781,485	+		Psyr_3155	0.50	-2.2
3,781,485	+		Psyr_3155	0.50	+0.1
3,781,485	+		Psyr_3155	0.50	-0.0
3,781,486	-		Psyr_3155	0.50	-0.2
3,781,486	-		Psyr_3155	0.50	-1.2
3,781,486	-		Psyr_3155	0.50	+1.3
3,781,486	-		Psyr_3155	0.50	+0.3
3,781,486	-		Psyr_3155	0.50	-1.6
3,781,542	+		Psyr_3155	0.61	+1.0
3,781,542	+		Psyr_3155	0.61	-0.2
3,781,542	+		Psyr_3155	0.61	-1.1
3,781,542	+		Psyr_3155	0.61	+0.1
3,781,542	+		Psyr_3155	0.61	+3.4
3,781,542	+		Psyr_3155	0.61	-0.2
3,781,543	-		Psyr_3155	0.61	-0.5
3,781,543	-		Psyr_3155	0.61	-0.0
3,781,543	-		Psyr_3155	0.61	-0.2
3,781,543	-		Psyr_3155	0.61	-0.1
3,781,543	-		Psyr_3155	0.61	-1.4
3,781,543	-		Psyr_3155	0.61	-1.1
3,781,543	-		Psyr_3155	0.61	+1.8
3,781,549	-		Psyr_3155	0.62	+0.6
3,781,582	+		Psyr_3155	0.68	-1.9
3,781,582	+		Psyr_3155	0.68	+2.5
3,781,582	+		Psyr_3155	0.68	+0.4
3,781,582	+		Psyr_3155	0.68	-0.7
3,781,582	+		Psyr_3155	0.68	+0.3
3,781,582	+		Psyr_3155	0.68	-1.4
3,781,582	+		Psyr_3155	0.68	+1.7
3,781,582	+		Psyr_3155	0.68	+1.3
3,781,582	+		Psyr_3155	0.68	-0.2
3,781,583	-		Psyr_3155	0.68	-0.7
3,781,583	-		Psyr_3155	0.68	-0.2
3,781,583	-		Psyr_3155	0.68	+1.8
3,781,583	-		Psyr_3155	0.68	-0.5
3,781,583	-		Psyr_3155	0.68	-0.8
3,781,583	-		Psyr_3155	0.68	+1.3
3,781,583	-		Psyr_3155	0.68	-0.4
3,781,583	-		Psyr_3155	0.68	-1.2
3,781,583	-		Psyr_3155	0.68	-0.9
3,781,584	+		Psyr_3155	0.69	+0.2
3,781,584	+		Psyr_3155	0.69	-0.5
3,781,584	+		Psyr_3155	0.69	+2.1
3,781,584	+		Psyr_3155	0.69	-3.1
3,781,584	+		Psyr_3155	0.69	-0.9
3,781,584	+		Psyr_3155	0.69	+1.1
3,781,584	+		Psyr_3155	0.69	-1.7
3,781,584	+		Psyr_3155	0.69	+1.1
3,781,584	+		Psyr_3155	0.69	-0.6
3,781,584	+		Psyr_3155	0.69	+0.2
3,781,585	-		Psyr_3155	0.69	-1.5
3,781,585	-		Psyr_3155	0.69	-1.1
3,781,585	-		Psyr_3155	0.69	+0.1
3,781,585	-				-0.9
3,781,585	-		Psyr_3155	0.69	-1.7
3,781,585	-		Psyr_3155	0.69	+0.7
3,781,585	-		Psyr_3155	0.69	+0.4
3,781,585	-		Psyr_3155	0.69	+0.6
3,781,585	-		Psyr_3155	0.69	+0.3
3,781,585	-		Psyr_3155	0.69	-0.1
3,781,585	-		Psyr_3155	0.69	+1.4
3,781,585	-		Psyr_3155	0.69	-0.1
3,781,674	-		Psyr_3155	0.85	-0.5
3,781,690	-		Psyr_3155	0.88	-0.4
3,781,701	-				+0.3
3,781,766	+				-1.5
3,781,767	-				-0.2
3,781,821	+				-1.3
3,781,822	-				-0.8
3,781,842	+				+0.5
3,782,037	+		Psyr_3156	0.27	+2.1
3,782,038	-		Psyr_3156	0.27	-0.1
3,782,054	+		Psyr_3156	0.29	+1.0
3,782,054	+		Psyr_3156	0.29	+0.7
3,782,054	+		Psyr_3156	0.29	+0.7
3,782,055	-		Psyr_3156	0.29	+0.4
3,782,055	-		Psyr_3156	0.29	+0.6
3,782,055	-		Psyr_3156	0.29	-0.6
3,782,068	-		Psyr_3156	0.30	-0.1
3,782,338	-		Psyr_3156	0.58	+2.8
3,782,338	-		Psyr_3156	0.58	-0.0
3,782,572	+		Psyr_3156	0.82	+1.0
3,782,573	-		Psyr_3156	0.82	-1.3
3,782,731	+				+0.7
3,782,731	+				-1.6
3,782,731	+				-0.4
3,782,732	-				+1.4
3,782,787	+				-0.9
3,782,787	+				-3.1
3,782,787	+				+1.6
3,782,787	+				-1.0
3,782,788	-				+1.1
3,782,788	-				-0.7
3,782,788	-				+0.7
3,782,788	-				+1.3
3,782,789	+				-0.7
3,782,789	+				+0.3
3,782,789	+				-0.1
3,782,789	+				+1.2
3,782,790	-				+0.2
3,782,790	-				+0.2
3,782,790	-				-0.5
3,782,790	-				+0.9
3,782,818	+				-1.2
3,782,818	+				+0.6
3,782,818	+				+2.1
3,782,818	+				+0.1
3,782,818	+				+1.1
3,782,819	-				+1.7
3,782,819	-				-0.7
3,782,819	-				-1.7
3,782,819	-				-0.8
3,782,903	+				+0.8
3,782,928	+				+1.7
3,782,929	-				-1.1
3,783,008	-				+0.4
3,783,017	+				-1.3
3,783,017	+				+0.9
3,783,018	-				+2.7
3,783,115	-				-0.2
3,783,115	-				+0.8
3,783,524	+		Psyr_3157	0.32	-0.7
3,783,632	+		Psyr_3157	0.39	+2.1