Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3015

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
3,608,210	+		Psyr_3014	0.68	+0.6
3,608,210	+		Psyr_3014	0.68	-0.4
3,608,210	+		Psyr_3014	0.68	+0.1
3,608,210	+		Psyr_3014	0.68	-0.6
3,608,210	+		Psyr_3014	0.68	-2.9
3,608,211	-		Psyr_3014	0.68	-0.7
3,608,211	-		Psyr_3014	0.68	-0.9
3,608,211	-		Psyr_3014	0.68	-2.1
3,608,550	+				-1.2
3,608,550	+				+0.3
3,608,550	+				+1.7
3,608,550	+				-0.4
3,608,550	+				-0.7
3,608,550	+				+1.1
3,608,551	-				+3.4
3,608,551	-				+1.1
3,608,551	-				-0.7
3,608,551	-				-1.9
3,608,551	-				+1.2
3,608,551	-				-0.9
3,608,551	-				-0.6
3,608,704	+				+0.4
3,608,810	-				+1.7
3,608,998	+		Psyr_3015	0.12	-0.2
3,608,998	+		Psyr_3015	0.12	-2.8
3,608,999	-		Psyr_3015	0.12	+1.5
3,609,119	-		Psyr_3015	0.15	-0.2
3,609,199	-		Psyr_3015	0.18	+1.0
3,609,212	-		Psyr_3015	0.18	-0.1
3,609,958	+		Psyr_3015	0.38	+2.4
3,610,211	+		Psyr_3015	0.44	-1.2
3,610,211	+		Psyr_3015	0.44	+0.1
3,610,212	-		Psyr_3015	0.44	-3.1
3,610,212	-		Psyr_3015	0.44	-0.5
3,610,255	+		Psyr_3015	0.46	-1.2
3,610,255	+		Psyr_3015	0.46	-1.9
3,610,256	-		Psyr_3015	0.46	-0.6
3,610,256	-		Psyr_3015	0.46	-1.9
3,610,256	-		Psyr_3015	0.46	-0.7
3,610,256	-		Psyr_3015	0.46	-1.2
3,610,412	-		Psyr_3015	0.50	-1.1
3,610,454	-				+0.5
3,610,559	-		Psyr_3015	0.54	-1.9
3,610,702	+		Psyr_3015	0.57	-1.0
3,610,703	-		Psyr_3015	0.58	-0.9
3,610,703	-		Psyr_3015	0.58	-3.4
3,610,703	-		Psyr_3015	0.58	-0.5
3,610,703	-		Psyr_3015	0.58	+1.4
3,610,747	+		Psyr_3015	0.59	+1.1
3,610,930	+		Psyr_3015	0.64	-0.3
3,610,931	-		Psyr_3015	0.64	-2.2
3,611,767	+		Psyr_3015	0.86	-0.9
3,611,767	+		Psyr_3015	0.86	+0.6
3,611,767	+		Psyr_3015	0.86	-2.4
3,611,768	-		Psyr_3015	0.86	-0.5
3,611,768	-		Psyr_3015	0.86	+5.4
3,611,768	-		Psyr_3015	0.86	+0.7
3,611,845	+		Psyr_3015	0.88	-0.0
3,611,845	+		Psyr_3015	0.88	-1.3
3,611,846	-		Psyr_3015	0.88	+0.5
3,611,846	-		Psyr_3015	0.88	+0.6
3,611,846	-		Psyr_3015	0.88	-0.2
3,611,846	-		Psyr_3015	0.88	+0.3
3,612,091	+				+0.1
3,612,092	-				+0.1
3,612,092	-				-1.4
3,612,092	-				+3.7
3,612,152	-				-0.5
3,612,254	+				+0.3
3,612,254	+				-1.2
3,612,255	-				-1.1
3,612,294	+				-2.0
3,613,163	-		Psyr_3016	0.80	-0.4
3,613,163	-		Psyr_3016	0.80	-0.7