Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2870

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
3,444,087	+		Psyr_2869	0.35	+1.3
3,444,087	+		Psyr_2869	0.35	+0.4
3,444,088	-		Psyr_2869	0.35	-0.8
3,444,088	-		Psyr_2869	0.35	-2.4
3,444,105	+		Psyr_2869	0.36	-1.1
3,444,105	+		Psyr_2869	0.36	-1.4
3,444,434	+		Psyr_2869	0.60	-0.2
3,444,434	+		Psyr_2869	0.60	+1.0
3,444,435	-		Psyr_2869	0.60	-2.4
3,444,511	-		Psyr_2869	0.65	-0.3
3,444,589	-		Psyr_2869	0.71	+0.8
3,444,805	-		Psyr_2869	0.86	+0.3
3,444,813	+		Psyr_2869	0.87	-2.2
3,444,813	+		Psyr_2869	0.87	+0.5
3,444,814	-		Psyr_2869	0.87	-0.3
3,444,903	+				+0.4
3,444,904	-				+2.2
3,445,000	+				-0.1
3,445,000	+				-1.3
3,445,000	+				-1.2
3,445,000	+				-3.1
3,445,000	+				+0.6
3,445,000	+				+0.4
3,445,000	+				-0.2
3,445,000	+				-1.1
3,445,000	+				+0.4
3,445,000	+				-1.5
3,445,000	+				+0.2
3,445,001	-				+0.3
3,445,001	-				+1.6
3,445,001	-				+3.5
3,445,001	-				+0.6
3,445,001	-				-0.0
3,445,001	-				+1.2
3,445,001	-				-0.9
3,445,006	+				+0.5
3,445,006	+				+0.6
3,445,006	+				+0.7
3,445,007	-				+1.2
3,445,007	-				-1.6
3,445,007	-				+0.9
3,445,064	-		Psyr_2870	0.13	+0.6
3,445,137	-		Psyr_2870	0.30	+4.2
3,445,294	+		Psyr_2870	0.66	+0.2
3,445,295	-		Psyr_2870	0.66	+0.4
3,445,451	+				-0.3
3,445,522	+				+3.5
3,445,522	+				-0.6
3,445,523	-				+2.2
3,445,812	-		Psyr_2871	0.29	-0.6
3,445,812	-		Psyr_2871	0.29	+0.7
3,446,007	+		Psyr_2871	0.45	+1.0
3,446,023	-		Psyr_2871	0.46	+1.5
3,446,073	-		Psyr_2871	0.50	-0.2
3,446,186	-		Psyr_2871	0.60	+0.4
3,446,317	+		Psyr_2871	0.70	-0.6
3,446,317	+		Psyr_2871	0.70	+0.0