Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2830

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
3,403,646	+				-0.5
3,403,647	-				-3.3
3,403,674	-				-0.4
3,403,825	+				-0.8
3,403,825	+				-0.4
3,403,825	+				+2.2
3,403,826	-				-0.8
3,403,826	-				+0.7
3,403,826	-				+1.0
3,403,830	+				+0.3
3,403,845	+				+0.8
3,403,846	-				-0.1
3,403,847	+				-1.4
3,403,847	+				+0.4
3,403,847	+				+0.8
3,403,847	+				+0.4
3,403,847	+				+0.2
3,403,848	-				+0.2
3,403,848	-				+0.4
3,403,848	-				+0.7
3,403,848	-				+1.5
3,403,848	-				-0.4
3,403,848	-				-0.4
3,403,848	-				-2.4
3,403,848	-				+0.3
3,403,848	-				-0.5
3,403,848	-				+0.5
3,403,848	-				+1.7
3,403,848	-				+0.1
3,403,848	-				+1.0
3,403,848	-				-0.4
3,403,856	-				-0.7
3,403,933	+				-0.3
3,403,934	-				-1.8
3,404,009	-				+0.6
3,404,020	+				-0.1
3,404,021	-				-0.1
3,404,030	+				-1.6
3,404,030	+				+0.8
3,404,030	+				-0.2
3,404,030	+				-0.7
3,404,030	+				-0.9
3,404,030	+				-0.8
3,404,030	+				-0.0
3,404,030	+				-0.1
3,404,031	-				+0.9
3,404,032	+				-0.1
3,404,032	+				-0.7
3,404,032	+				+0.6
3,404,032	+				-2.5
3,404,032	+				-0.8
3,404,032	+				+1.0
3,404,033	-				+1.2
3,404,033	-				+1.7
3,404,033	-				+2.1
3,404,033	-				+0.9
3,404,033	-				+1.7
3,404,033	-				-1.2
3,404,033	-				+0.0
3,404,033	-				+0.4
3,404,033	-				+1.0
3,404,033	-				+1.2
3,404,033	-				-0.4
3,404,044	+				-1.8
3,404,070	+				+0.3
3,404,070	+				+1.3
3,404,070	+				-1.0
3,404,071	-				-0.3
3,404,071	-				-2.0
3,404,147	+				-0.8
3,404,148	-				+0.9
3,404,213	+				-0.6
3,404,213	+				+2.7
3,404,213	+				+0.6
3,404,213	+				-0.2
3,404,214	-				+1.5
3,404,214	-				-0.4
3,404,214	-				+1.5
3,404,214	-				+1.5
3,404,255	-		Psyr_2829	0.19	-3.1
3,404,296	+		Psyr_2829	0.32	-0.7
3,404,296	+		Psyr_2829	0.32	+0.9
3,404,297	-		Psyr_2829	0.33	-0.2
3,404,297	-		Psyr_2829	0.33	+0.4
3,404,371	+		Psyr_2829	0.56	+0.2
3,404,653	-		Psyr_2830	0.23	-0.6
3,404,653	-		Psyr_2830	0.23	+0.2
3,404,668	-		Psyr_2830	0.25	+4.2
3,404,668	-		Psyr_2830	0.25	+1.9
3,405,023	-		Psyr_2830	0.80	+1.2
3,405,101	+				-1.8
3,405,153	+				+0.5
3,405,161	+				+2.6
3,405,161	+				-0.5
3,405,162	-				-0.5
3,405,162	-				-0.5
3,405,167	+				-1.4
3,405,167	+				+0.4
3,405,168	-				-1.9
3,405,220	-				-0.3
3,405,287	-				+2.3
3,405,287	-				+1.0
3,405,384	-				+0.9
3,405,384	-				+0.0
3,405,412	-				-0.8
3,406,026	+				-0.2
3,406,026	+				-1.6
3,406,026	+				-1.8
3,406,026	+				+1.2
3,406,026	+				+0.9
3,406,026	+				-0.6
3,406,026	+				-0.8
3,406,030	+				+0.9
3,406,030	+				+0.4
3,406,104	+				-2.7
3,406,114	-				+0.4