Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2592

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
3,037,867	+		Psyr_2591	0.17	-2.4
3,037,868	-		Psyr_2591	0.18	+1.2
3,038,014	+		Psyr_2591	0.32	-1.1
3,038,014	+		Psyr_2591	0.32	-1.7
3,038,014	+		Psyr_2591	0.32	-2.5
3,038,014	+		Psyr_2591	0.32	-1.7
3,038,015	-		Psyr_2591	0.32	-2.4
3,038,378	-		Psyr_2591	0.69	-1.8
3,038,409	+		Psyr_2591	0.72	+2.2
3,038,463	+		Psyr_2591	0.78	+1.2
3,038,463	+		Psyr_2591	0.78	-2.7
3,038,464	-		Psyr_2591	0.78	-0.3
3,038,482	+		Psyr_2591	0.80	-2.4
3,038,482	+		Psyr_2591	0.80	+0.2
3,038,482	+		Psyr_2591	0.80	+0.2
3,038,482	+		Psyr_2591	0.80	-2.8
3,038,482	+		Psyr_2591	0.80	+1.2
3,038,482	+		Psyr_2591	0.80	-1.1
3,038,483	-		Psyr_2591	0.80	-0.5
3,038,483	-		Psyr_2591	0.80	-1.8
3,038,483	-		Psyr_2591	0.80	-2.1
3,038,483	-		Psyr_2591	0.80	-2.8
3,038,483	-		Psyr_2591	0.80	-2.6
3,038,483	-		Psyr_2591	0.80	+0.2
3,038,483	-		Psyr_2591	0.80	-1.6
3,038,779	+				-0.4
3,039,031	-		Psyr_2592	0.34	+1.2
3,039,031	-		Psyr_2592	0.34	-2.4
3,039,031	-		Psyr_2592	0.34	-0.7
3,039,031	-		Psyr_2592	0.34	-3.3
3,039,031	-		Psyr_2592	0.34	-2.5
3,039,118	-		Psyr_2592	0.43	-1.8
3,039,118	-		Psyr_2592	0.43	-1.1
3,039,249	+		Psyr_2592	0.56	+1.6
3,039,249	+		Psyr_2592	0.56	-0.4
3,039,249	+		Psyr_2592	0.56	-2.6
3,039,250	-		Psyr_2592	0.56	-0.8
3,039,273	+		Psyr_2592	0.58	-3.2
3,039,273	+		Psyr_2592	0.58	-1.6
3,039,273	+		Psyr_2592	0.58	+0.7
3,039,273	+		Psyr_2592	0.58	+1.2
3,039,274	-		Psyr_2592	0.58	-2.5
3,039,274	-		Psyr_2592	0.58	-0.6
3,039,682	-				-2.5
3,039,685	+				+0.4
3,039,686	-				-1.8
3,039,705	+				+0.6
3,039,713	+				-1.0
3,039,714	-				-1.8
3,039,714	-				-0.6
3,040,199	+		Psyr_2593	0.61	-0.7
3,040,199	+		Psyr_2593	0.61	-1.4
3,040,199	+		Psyr_2593	0.61	+0.4
3,040,199	+		Psyr_2593	0.61	-1.0
3,040,199	+		Psyr_2593	0.61	-1.9
3,040,200	-		Psyr_2593	0.61	-0.1
3,040,200	-		Psyr_2593	0.61	-2.0
3,040,200	-				+1.2
3,040,200	-		Psyr_2593	0.61	+1.2
3,040,200	-		Psyr_2593	0.61	-1.4