Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2573

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,986,274	+				-1.1
2,986,275	-				-0.3
2,986,348	-				-0.7
2,986,348	-				-0.2
2,986,350	+				+0.6
2,986,351	-				-0.7
2,986,354	+				-1.7
2,986,354	+				-0.8
2,986,378	+				+0.7
2,986,421	+				-0.5
2,986,422	-				+0.5
2,986,422	-				+0.7
2,986,481	+				-1.0
2,986,816	+		Psyr_2572	0.47	+0.2
2,986,874	+		Psyr_2572	0.60	-1.0
2,986,878	+		Psyr_2572	0.60	+0.1
2,986,879	-		Psyr_2572	0.61	+1.8
2,987,059	-				-2.0
2,987,192	-				+0.1
2,987,300	+		Psyr_2573	0.20	-1.1
2,987,444	-		Psyr_2573	0.34	-0.8
2,987,590	+		Psyr_2573	0.49	-1.8
2,987,591	-		Psyr_2573	0.49	-1.4
2,987,694	+		Psyr_2573	0.59	+0.2
2,987,970	-		Psyr_2573	0.86	+0.3
2,988,112	+				-0.4
2,988,230	+				-0.8
2,988,231	-				-1.3
2,988,342	+				+0.7
2,988,342	+				-1.1
2,988,343	-				+0.2
2,988,388	+				+1.2
2,988,388	+				+2.1
2,988,388	+				+1.1
2,988,388	+				-0.1
2,988,389	-				+1.2
2,988,389	-				-1.0
2,988,389	-				-0.6
2,988,389	-				+0.2
2,988,799	+		Psyr_2574	0.26	-0.7
2,988,800	-		Psyr_2574	0.26	+1.3
2,988,841	+		Psyr_2574	0.28	-0.3
2,988,841	+		Psyr_2574	0.28	-2.1
2,988,841	+		Psyr_2574	0.28	-1.1
2,988,841	+		Psyr_2574	0.28	-0.6
2,988,841	+		Psyr_2574	0.28	+0.5
2,988,841	+		Psyr_2574	0.28	+0.9
2,988,841	+		Psyr_2574	0.28	-1.8
2,988,841	+		Psyr_2574	0.28	-1.8
2,988,841	+		Psyr_2574	0.28	-1.5
2,988,842	-		Psyr_2574	0.28	-1.8
2,988,842	-		Psyr_2574	0.28	+0.9
2,988,842	-		Psyr_2574	0.28	+0.3
2,988,842	-		Psyr_2574	0.28	+0.3
2,988,842	-		Psyr_2574	0.28	+1.4
2,988,842	-		Psyr_2574	0.28	-0.7
2,988,842	-		Psyr_2574	0.28	-0.3
2,988,842	-		Psyr_2574	0.28	-1.9
2,988,907	+		Psyr_2574	0.31	+1.0
2,988,908	-		Psyr_2574	0.31	-1.0
2,988,968	-		Psyr_2574	0.33	-1.1
2,988,968	-		Psyr_2574	0.33	-3.2
2,988,971	-		Psyr_2574	0.33	+0.9