Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2570

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,982,878	+				-0.4
2,982,950	+		Psyr_2569	0.14	-0.5
2,982,950	+		Psyr_2569	0.14	-1.0
2,982,951	-		Psyr_2569	0.14	+1.3
2,983,433	+		Psyr_2569	0.62	-1.1
2,983,434	-		Psyr_2569	0.62	+0.9
2,983,557	-		Psyr_2569	0.74	-0.7
2,983,579	+		Psyr_2569	0.77	-0.5
2,983,607	+		Psyr_2569	0.79	-0.5
2,983,607	+		Psyr_2569	0.79	-1.5
2,983,607	+		Psyr_2569	0.79	+0.6
2,983,607	+		Psyr_2569	0.79	+0.3
2,983,608	-		Psyr_2569	0.79	-2.0
2,983,608	-		Psyr_2569	0.79	+3.8
2,983,608	-		Psyr_2569	0.79	+0.2
2,983,608	-		Psyr_2569	0.79	-1.9
2,983,730	+				+0.6
2,983,730	+				-0.1
2,983,759	-				+1.2
2,983,838	+				-1.3
2,983,839	-				-3.0
2,983,932	+				-1.1
2,983,933	-				-0.8
2,983,936	-				+2.0
2,984,076	+		Psyr_2570	0.22	+0.1
2,984,163	+		Psyr_2570	0.31	+0.3
2,984,236	-		Psyr_2570	0.39	-0.9
2,984,251	-		Psyr_2570	0.40	+0.9
2,984,259	+		Psyr_2570	0.41	+0.2
2,984,303	-		Psyr_2570	0.45	-0.1
2,984,352	+		Psyr_2570	0.50	+1.2
2,984,483	+		Psyr_2570	0.64	+0.5
2,984,628	+		Psyr_2570	0.79	-0.1
2,984,628	+		Psyr_2570	0.79	+1.0
2,984,628	+		Psyr_2570	0.79	-1.4
2,984,628	+		Psyr_2570	0.79	+1.2
2,984,629	-		Psyr_2570	0.79	+1.8
2,984,629	-		Psyr_2570	0.79	+1.5
2,984,629	-		Psyr_2570	0.79	+0.6
2,984,743	+				+0.8
2,985,008	+		Psyr_2571	0.12	+2.2
2,985,279	+		Psyr_2571	0.30	+1.5
2,985,279	+		Psyr_2571	0.30	-0.7
2,985,280	-		Psyr_2571	0.30	-0.6
2,985,284	-		Psyr_2571	0.30	-0.6
2,985,284	-		Psyr_2571	0.30	-1.0
2,985,284	-				+1.2
2,985,458	+		Psyr_2571	0.42	-0.2
2,985,459	-		Psyr_2571	0.42	-1.9
2,985,459	-		Psyr_2571	0.42	+1.5
2,985,459	-		Psyr_2571	0.42	+0.8
2,985,568	+		Psyr_2571	0.49	+1.6
2,985,568	+		Psyr_2571	0.49	+0.2
2,985,569	-		Psyr_2571	0.49	+1.0
2,985,569	-		Psyr_2571	0.49	-0.1
2,985,589	+		Psyr_2571	0.51	+0.8
2,985,589	+		Psyr_2571	0.51	-1.6
2,985,642	+		Psyr_2571	0.54	+1.2
2,985,643	-		Psyr_2571	0.54	+2.2
2,985,683	+		Psyr_2571	0.57	-1.1
2,985,725	-		Psyr_2571	0.60	+0.5
2,985,728	+		Psyr_2571	0.60	+2.8
2,985,728	+		Psyr_2571	0.60	-0.3
2,985,728	+		Psyr_2571	0.60	-0.5
2,985,728	+		Psyr_2571	0.60	+0.5
2,985,728	+		Psyr_2571	0.60	+0.9
2,985,728	+		Psyr_2571	0.60	-1.4
2,985,728	+		Psyr_2571	0.60	-0.6
2,985,728	+		Psyr_2571	0.60	+0.1
2,985,728	+		Psyr_2571	0.60	-2.0
2,985,728	+		Psyr_2571	0.60	-0.7
2,985,728	+		Psyr_2571	0.60	+0.5
2,985,728	+		Psyr_2571	0.60	-1.9
2,985,728	+		Psyr_2571	0.60	+1.6
2,985,728	+		Psyr_2571	0.60	-0.3
2,985,728	+		Psyr_2571	0.60	-0.9
2,985,729	-		Psyr_2571	0.60	+0.4
2,985,729	-		Psyr_2571	0.60	+0.8
2,985,729	-		Psyr_2571	0.60	-1.1
2,985,729	-		Psyr_2571	0.60	-0.1
2,985,729	-		Psyr_2571	0.60	-0.0
2,985,729	-		Psyr_2571	0.60	+1.8