Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2564

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,977,147	+				-0.6
2,977,147	+				-3.0
2,977,148	-				+0.3
2,977,148	-				-1.3
2,977,148	-				-0.3
2,977,148	-				-0.3
2,977,542	-		Psyr_2563	0.29	+0.8
2,977,641	+		Psyr_2563	0.41	-0.4
2,977,822	-		Psyr_2563	0.64	+0.0
2,977,979	-		Psyr_2563	0.84	-0.1
2,977,988	+		Psyr_2563	0.85	+2.3
2,977,989	-		Psyr_2563	0.85	+1.5
2,978,106	-				-2.0
2,978,106	-				+0.4
2,978,106	-				-0.8
2,978,106	-				+1.3
2,978,109	+				+1.4
2,978,109	+				+0.5
2,978,110	-				-1.4
2,978,197	-				-1.2
2,978,292	-		Psyr_2564	0.21	-0.1
2,978,334	+		Psyr_2564	0.27	+1.0
2,978,346	+		Psyr_2564	0.28	+0.7
2,978,617	-		Psyr_2564	0.65	+0.0
2,978,686	-		Psyr_2564	0.74	-0.1
2,978,703	-		Psyr_2564	0.77	+0.3
2,978,764	+		Psyr_2564	0.85	+3.2
2,978,765	-		Psyr_2564	0.85	+1.0
2,978,765	-		Psyr_2564	0.85	+0.3
2,978,891	-				-0.2
2,978,892	+				+0.1
2,978,893	-				-1.4
2,978,990	-				-0.6
2,979,108	+		Psyr_2565	0.18	-0.1
2,979,479	+		Psyr_2565	0.74	-0.6
2,979,770	-		Psyr_2566	0.12	-0.9
2,979,770	-		Psyr_2566	0.12	-2.0
2,979,770	-		Psyr_2566	0.12	+1.0
2,979,770	-		Psyr_2566	0.12	-0.5
2,979,770	-		Psyr_2566	0.12	+0.8
2,979,781	+		Psyr_2566	0.13	+2.0
2,979,781	+		Psyr_2566	0.13	+1.9
2,979,782	-		Psyr_2566	0.13	-0.8