Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2515

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,923,658	+		Psyr_2513	0.79	+0.0
2,923,659	-		Psyr_2513	0.80	+2.2
2,923,707	-		Psyr_2513	0.84	-0.6
2,923,707	-		Psyr_2513	0.84	-0.0
2,923,773	-				-0.4
2,923,985	+		Psyr_2514	0.14	-0.3
2,924,043	+		Psyr_2514	0.22	-0.1
2,924,043	+		Psyr_2514	0.22	-1.7
2,924,043	+		Psyr_2514	0.22	+0.2
2,924,044	-		Psyr_2514	0.22	+0.2
2,924,044	-		Psyr_2514	0.22	-0.4
2,924,044	-		Psyr_2514	0.22	+0.2
2,924,044	-		Psyr_2514	0.22	-2.4
2,924,314	-		Psyr_2514	0.60	-1.8
2,924,338	+		Psyr_2514	0.63	-1.8
2,924,414	+		Psyr_2514	0.74	-2.7
2,924,545	+				-1.4
2,924,576	+				+0.9
2,924,576	+				-0.4
2,924,577	-				-0.4
2,924,577	-				+2.2
2,924,577	-				-0.4
2,924,577	-				+0.7
2,924,601	+				-3.2
2,924,601	+				+0.6
2,924,601	+				-0.8
2,924,601	+				+1.2
2,924,601	+				+2.8
2,924,601	+				+0.1
2,924,602	-				+2.2
2,924,602	-				+0.1
2,924,602	-				-1.6
2,924,602	-				+1.2
2,924,602	-				+0.6
2,924,602	-				+0.4
2,924,602	-				+0.7
2,924,913	+		Psyr_2515	0.37	+1.7
2,924,913	+		Psyr_2515	0.37	-0.6
2,924,913	+		Psyr_2515	0.37	-0.9
2,924,913	+		Psyr_2515	0.37	-0.5
2,924,913	+		Psyr_2515	0.37	+0.7
2,924,913	+		Psyr_2515	0.37	-0.8
2,924,913	+		Psyr_2515	0.37	-1.3
2,924,914	-		Psyr_2515	0.37	-0.8
2,924,914	-		Psyr_2515	0.37	-0.1
2,924,914	-		Psyr_2515	0.37	+0.8
2,924,914	-		Psyr_2515	0.37	-1.3
2,924,914	-		Psyr_2515	0.37	-0.5
2,924,914	-		Psyr_2515	0.37	-2.1
2,924,914	-		Psyr_2515	0.37	+0.2
2,924,914	-		Psyr_2515	0.37	-2.6
2,924,977	-		Psyr_2515	0.44	-0.8
2,925,097	+		Psyr_2515	0.58	-1.8
2,925,097	+		Psyr_2515	0.58	-1.8
2,925,097	+		Psyr_2515	0.58	+0.5
2,925,098	-		Psyr_2515	0.58	+0.7
2,925,109	-		Psyr_2515	0.60	-0.2
2,925,282	+		Psyr_2515	0.80	-0.2
2,925,733	+		Psyr_2516	0.28	-0.2
2,925,767	+		Psyr_2516	0.32	+1.2
2,925,768	-		Psyr_2516	0.32	+0.2
2,925,787	+		Psyr_2516	0.34	-0.9
2,925,795	-		Psyr_2516	0.34	-2.0
2,925,795	-		Psyr_2516	0.34	-0.3
2,925,795	-		Psyr_2516	0.34	+3.2
2,925,818	+		Psyr_2516	0.37	-0.2
2,925,886	+		Psyr_2516	0.43	-0.2
2,925,886	+		Psyr_2516	0.43	+0.4
2,925,886	+		Psyr_2516	0.43	+0.6
2,925,886	+		Psyr_2516	0.43	-0.1
2,925,886	+		Psyr_2516	0.43	-0.3
2,925,886	+		Psyr_2516	0.43	+0.3
2,925,887	-		Psyr_2516	0.43	-2.5
2,925,887	-		Psyr_2516	0.43	-0.6
2,925,887	-		Psyr_2516	0.43	-0.2
2,925,887	-		Psyr_2516	0.43	-0.7
2,925,887	-		Psyr_2516	0.43	-0.2
2,925,887	-		Psyr_2516	0.43	+1.6
2,925,887	-		Psyr_2516	0.43	+0.2
2,925,887	-		Psyr_2516	0.43	-0.3
2,925,887	-		Psyr_2516	0.43	-0.3
2,925,887	-		Psyr_2516	0.43	+0.5
2,925,887	-		Psyr_2516	0.43	+1.1
2,926,103	+		Psyr_2516	0.65	-0.8
2,926,103	+		Psyr_2516	0.65	+2.2
2,926,109	+		Psyr_2516	0.65	+2.7
2,926,109	+		Psyr_2516	0.65	-0.3
2,926,109	+		Psyr_2516	0.65	+1.5
2,926,109	+		Psyr_2516	0.65	-1.6
2,926,109	+		Psyr_2516	0.65	-0.3
2,926,109	+		Psyr_2516	0.65	-1.8
2,926,109	+		Psyr_2516	0.65	+0.0
2,926,109	+		Psyr_2516	0.65	+1.0
2,926,110	-		Psyr_2516	0.65	+1.2
2,926,110	-		Psyr_2516	0.65	-0.0
2,926,110	-		Psyr_2516	0.65	+0.3
2,926,110	-		Psyr_2516	0.65	+0.2
2,926,110	-		Psyr_2516	0.65	+0.2
2,926,110	-		Psyr_2516	0.65	+0.2
2,926,110	-		Psyr_2516	0.65	+0.7
2,926,199	+		Psyr_2516	0.74	-1.2
2,926,200	-		Psyr_2516	0.74	+0.4
2,926,307	+		Psyr_2516	0.85	-0.6
2,926,308	-		Psyr_2516	0.85	+0.7
2,926,310	+		Psyr_2516	0.85	+1.0
2,926,310	+		Psyr_2516	0.85	+0.1
2,926,311	-		Psyr_2516	0.85	+0.0
2,926,339	+		Psyr_2516	0.88	+0.2
2,926,340	-		Psyr_2516	0.88	-1.2