Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2495

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,904,598	-		Psyr_2494	0.28	+0.3
2,904,643	-		Psyr_2494	0.32	-2.2
2,904,643	-		Psyr_2494	0.32	+0.1
2,904,711	+		Psyr_2494	0.38	-0.2
2,904,711	+		Psyr_2494	0.38	+0.5
2,904,711	+		Psyr_2494	0.38	+2.5
2,904,711	+		Psyr_2494	0.38	+0.9
2,904,712	-		Psyr_2494	0.38	-1.1
2,904,712	-		Psyr_2494	0.38	-0.9
2,904,852	+		Psyr_2494	0.51	-0.0
2,904,852	+		Psyr_2494	0.51	-0.4
2,904,852	+		Psyr_2494	0.51	-0.2
2,904,853	-		Psyr_2494	0.51	+0.1
2,904,853	-		Psyr_2494	0.51	+2.3
2,904,853	-		Psyr_2494	0.51	-0.5
2,904,918	+		Psyr_2494	0.57	-0.7
2,904,918	+		Psyr_2494	0.57	-0.3
2,904,918	+		Psyr_2494	0.57	-0.7
2,904,918	+		Psyr_2494	0.57	+0.4
2,904,919	-		Psyr_2494	0.57	-0.7
2,905,318	+				+1.4
2,905,422	+				-0.7
2,905,453	-				+1.1
2,905,453	-				-0.0
2,905,455	+				+0.3
2,905,455	+				+1.0
2,905,475	-				-0.8
2,905,475	-				-0.3
2,905,502	-				-0.4
2,905,510	+				+0.0
2,905,511	-				+0.1
2,905,755	+		Psyr_2495	0.18	+0.3
2,905,903	+		Psyr_2495	0.27	+1.0
2,905,903	+		Psyr_2495	0.27	-0.2
2,905,903	+		Psyr_2495	0.27	-0.6
2,906,344	+		Psyr_2495	0.55	+0.4
2,906,344	+		Psyr_2495	0.55	-0.5
2,906,344	+		Psyr_2495	0.55	+3.2
2,906,344	+		Psyr_2495	0.55	+1.0
2,906,345	-		Psyr_2495	0.55	+3.2
2,906,345	-		Psyr_2495	0.55	-2.4
2,906,345	-		Psyr_2495	0.55	-1.0
2,906,345	-		Psyr_2495	0.55	+0.9
2,906,353	+		Psyr_2495	0.55	-0.6
2,906,353	+		Psyr_2495	0.55	-0.6
2,906,353	+		Psyr_2495	0.55	+1.0
2,906,354	-		Psyr_2495	0.55	+1.0
2,906,354	-		Psyr_2495	0.55	+0.6
2,906,354	-		Psyr_2495	0.55	-0.1
2,906,354	-				+0.4
2,906,354	-		Psyr_2495	0.55	+2.2
2,906,756	-		Psyr_2495	0.81	-0.6
2,906,756	-		Psyr_2495	0.81	+1.9
2,906,756	-		Psyr_2495	0.81	-0.3
2,906,836	+		Psyr_2495	0.86	+0.2
2,907,047	+				+2.7
2,907,073	+				-1.3
2,907,188	+				-1.0
2,907,188	+				-1.4
2,907,188	+				-1.5
2,907,189	-				-0.4
2,907,189	-				-1.5
2,907,189	-				-0.2
2,907,194	+				+1.2
2,907,194	+				+1.5
2,907,195	-				-0.1
2,907,438	+				+0.4
2,907,464	-				+0.5
2,907,604	-		Psyr_2496	0.20	+0.4
2,907,651	+		Psyr_2496	0.26	+0.7
2,907,651	+		Psyr_2496	0.26	-0.7
2,907,718	-		Psyr_2496	0.34	-0.3
2,907,738	+		Psyr_2496	0.36	-0.3
2,907,738	+		Psyr_2496	0.36	-0.4
2,907,738	+		Psyr_2496	0.36	+1.2
2,907,738	+		Psyr_2496	0.36	-0.3
2,907,739	-		Psyr_2496	0.36	+0.9
2,907,739	-		Psyr_2496	0.36	-0.4
2,907,739	-		Psyr_2496	0.36	-0.8
2,907,808	+		Psyr_2496	0.44	+0.5
2,907,809	-		Psyr_2496	0.44	+0.9
2,907,953	+		Psyr_2496	0.62	-0.1
2,907,953	+		Psyr_2496	0.62	-1.0
2,907,953	+		Psyr_2496	0.62	+0.3
2,908,029	+		Psyr_2496	0.71	-0.3
2,908,029	+		Psyr_2496	0.71	-0.5
2,908,029	+		Psyr_2496	0.71	-0.8
2,908,029	+		Psyr_2496	0.71	-0.8
2,908,030	-		Psyr_2496	0.71	-0.0
2,908,030	-		Psyr_2496	0.71	+0.8
2,908,030	-		Psyr_2496	0.71	+0.4
2,908,030	-		Psyr_2496	0.71	+0.5
2,908,043	+		Psyr_2496	0.72	+0.4