Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2351

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,726,126	+				+1.6
2,726,126	+				-0.1
2,726,168	-				+0.3
2,726,168	-				-0.9
2,726,173	+				-2.0
2,726,173	+				-0.3
2,726,174	-				-0.9
2,726,180	+				-1.5
2,726,180	+				-1.2
2,726,180	+				+1.2
2,726,180	+				+0.4
2,726,181	-				-2.1
2,726,181	-				-0.4
2,726,181	-				+2.2
2,726,181	-				-0.4
2,726,181	-				+2.6
2,726,181	-				-0.3
2,726,210	+				-1.3
2,726,211	-				+0.8
2,726,236	-				+1.7
2,726,242	+				+1.3
2,726,268	-				+0.6
2,726,288	+				-0.5
2,726,426	+				-0.2
2,726,426	+				+0.0
2,726,426	+				+1.2
2,726,431	-				+0.3
2,726,451	+				-0.8
2,726,451	+				+2.7
2,726,451	+				+0.2
2,726,451	+				-0.2
2,726,451	+				+0.6
2,726,451	+				+0.1
2,726,451	+				-2.7
2,726,452	-				-1.8
2,726,452	-				-0.5
2,726,452	-				-0.9
2,726,452	-				-1.3
2,726,452	-				-0.4
2,726,452	-				+0.0
2,726,452	-				+0.2
2,726,519	+				-1.7
2,726,594	+		Psyr_2350	0.12	+1.0
2,726,652	+		Psyr_2350	0.24	+0.7
2,726,652	+		Psyr_2350	0.24	-1.2
2,726,652	+		Psyr_2350	0.24	-0.2
2,726,653	-		Psyr_2350	0.25	+0.8
2,726,653	-		Psyr_2350	0.25	+2.9
2,727,026	-				-0.3
2,727,026	-				-0.2
2,727,039	-				-0.7
2,727,055	-				+0.7
2,727,064	+				-0.2
2,727,101	+				+0.1
2,727,219	+		Psyr_2351	0.24	-1.3
2,727,219	+		Psyr_2351	0.24	+1.0
2,727,220	-		Psyr_2351	0.25	-0.7
2,727,222	+		Psyr_2351	0.25	+0.4
2,727,222	+		Psyr_2351	0.25	-1.1
2,727,222	+		Psyr_2351	0.25	-1.4
2,727,222	+		Psyr_2351	0.25	+4.6
2,727,222	+		Psyr_2351	0.25	-2.4
2,727,223	-		Psyr_2351	0.25	+0.2
2,727,223	-		Psyr_2351	0.25	-0.0
2,727,259	-		Psyr_2351	0.31	-1.3
2,727,631	+				-1.2
2,727,631	+				-0.1
2,727,632	-				-2.7
2,727,632	-				+0.9
2,727,632	-				-0.6
2,727,702	+				-0.4
2,727,743	+				-0.4
2,727,926	+				+0.7
2,727,926	+				+0.6
2,727,949	+				-0.2
2,727,950	-				+1.0
2,728,003	+		Psyr_2352	0.10	+0.3
2,728,075	+		Psyr_2352	0.24	+0.7
2,728,075	+		Psyr_2352	0.24	+0.0
2,728,075	+		Psyr_2352	0.24	+1.4
2,728,075	+		Psyr_2352	0.24	-0.4
2,728,076	-		Psyr_2352	0.24	+2.5
2,728,076	-		Psyr_2352	0.24	-0.1
2,728,225	+		Psyr_2352	0.52	+0.0
2,728,225	+		Psyr_2352	0.52	-0.8
2,728,378	+		Psyr_2352	0.81	-1.5
2,728,378	+		Psyr_2352	0.81	+0.2
2,728,378	+		Psyr_2352	0.81	+0.8
2,728,378	+		Psyr_2352	0.81	-2.8
2,728,379	-		Psyr_2352	0.82	-2.2
2,728,379	-		Psyr_2352	0.82	+0.9
2,728,379	-		Psyr_2352	0.82	-0.4
2,728,379	-		Psyr_2352	0.82	-2.1
2,728,475	+				+0.8
2,728,475	+				+0.2
2,728,495	+				+0.4
2,728,495	+				+0.3
2,728,495	+				+1.0
2,728,496	-				+0.3
2,728,530	+				-2.4
2,728,530	+				-0.3
2,728,531	-				+0.3
2,728,531	-				-0.2
2,728,531	-				-0.4
2,728,565	+				-0.4
2,728,565	+				-0.9
2,728,565	+				-1.2
2,728,565	+				-0.3
2,728,566	-				-1.3
2,728,566	-				+0.5
2,728,566	-				+0.7
2,728,566	-				+0.2
2,728,566	-				+0.3
2,728,570	+				+0.6
2,728,571	-				+1.8
2,728,571	-				+0.6
2,728,571	-				+1.6
2,728,574	+				-0.9
2,728,575	-				-0.2