Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2280

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,646,588	+				-0.1
2,646,588	+				+1.7
2,646,588	+				+0.0
2,646,588	+				-0.2
2,646,589	-				+0.1
2,646,597	+				+0.9
2,646,646	-				+1.0
2,646,812	-				-0.8
2,646,812	-				-0.4
2,646,813	+				+0.1
2,646,813	+				+0.0
2,646,814	-				+2.8
2,646,814	-				+2.8
2,646,814	-				+0.3
2,646,814	-				+2.4
2,646,862	+		Psyr_2279	0.22	-1.5
2,646,928	+		Psyr_2279	0.42	-1.1
2,646,928	+		Psyr_2279	0.42	+0.7
2,646,928	+		Psyr_2279	0.42	+0.3
2,646,928	+		Psyr_2279	0.42	-1.5
2,646,928	+		Psyr_2279	0.42	-1.1
2,646,929	-		Psyr_2279	0.42	-1.3
2,646,930	+		Psyr_2279	0.42	-2.2
2,646,930	+		Psyr_2279	0.42	-0.5
2,646,930	+		Psyr_2279	0.42	-0.8
2,646,931	-		Psyr_2279	0.43	+3.5
2,646,931	-		Psyr_2279	0.43	+0.2
2,646,931	-		Psyr_2279	0.43	-1.5
2,646,945	+		Psyr_2279	0.47	-0.1
2,646,945	+		Psyr_2279	0.47	-2.5
2,646,945	+		Psyr_2279	0.47	+0.6
2,646,946	-		Psyr_2279	0.47	+0.3
2,646,946	-		Psyr_2279	0.47	+1.8
2,646,946	-		Psyr_2279	0.47	+0.0
2,646,946	-		Psyr_2279	0.47	+1.2
2,647,052	+		Psyr_2279	0.79	-0.9
2,647,194	-				-1.4
2,647,408	+				+1.0
2,647,447	-				+0.5
2,647,546	+				-0.0
2,647,547	-				-2.0
2,647,547	-				-1.7
2,647,794	+		Psyr_2280	0.32	-0.4
2,647,795	-		Psyr_2280	0.32	-1.3
2,647,795	-		Psyr_2280	0.32	-0.7
2,648,088	+		Psyr_2280	0.58	+0.4
2,648,301	+		Psyr_2280	0.78	-0.7
2,648,338	+		Psyr_2280	0.81	-1.4
2,648,359	-		Psyr_2280	0.83	-0.7
2,648,483	+				+0.5
2,648,483	+				+0.4
2,648,483	+				-1.7
2,648,484	-				-1.5
2,648,484	-				+0.6
2,648,652	+				+1.2
2,648,652	+				-0.0
2,648,652	+				-2.0
2,648,652	+				-1.3
2,648,652	+				-0.4
2,648,653	-				-0.8
2,648,653	-				-0.0
2,648,675	+				+1.2
2,648,675	+				+0.6
2,648,676	-				+0.4
2,648,685	+				+0.8
2,648,686	-				-2.1
2,648,686	-				-1.4
2,648,695	+				-0.9
2,648,696	-				+0.9
2,648,743	+				-1.5
2,649,021	+		Psyr_2281	0.14	-1.0
2,649,177	+		Psyr_2281	0.23	-1.1
2,649,177	+		Psyr_2281	0.23	-3.4
2,649,288	+		Psyr_2281	0.30	+0.3
2,649,335	-		Psyr_2281	0.32	-2.3
2,649,335	-		Psyr_2281	0.32	-0.7
2,649,356	+		Psyr_2281	0.34	+1.2
2,649,424	-		Psyr_2281	0.38	-0.1
2,649,424	-		Psyr_2281	0.38	-0.4
2,649,424	-		Psyr_2281	0.38	-1.4
2,649,432	-		Psyr_2281	0.38	+0.6
2,649,433	+		Psyr_2281	0.38	+1.2
2,649,433	+		Psyr_2281	0.38	+1.3
2,649,433	+		Psyr_2281	0.38	-0.8
2,649,433	+		Psyr_2281	0.38	-2.3
2,649,433	+		Psyr_2281	0.38	+0.5
2,649,434	-		Psyr_2281	0.38	-0.7
2,649,434	-		Psyr_2281	0.38	-0.7
2,649,434	-		Psyr_2281	0.38	+0.1
2,649,434	-		Psyr_2281	0.38	-2.1
2,649,434	-		Psyr_2281	0.38	+0.2
2,649,434	-		Psyr_2281	0.38	+1.2
2,649,434	-		Psyr_2281	0.38	+1.2
2,649,434	-		Psyr_2281	0.38	+1.2