Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2262

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,625,954	+		Psyr_2261	0.19	+0.2
2,625,955	-		Psyr_2261	0.19	-2.6
2,625,955	-		Psyr_2261	0.19	+0.8
2,625,958	+		Psyr_2261	0.19	+0.6
2,625,958	+		Psyr_2261	0.19	+0.4
2,625,959	-		Psyr_2261	0.20	-0.5
2,625,959	-		Psyr_2261	0.20	-0.9
2,626,076	+		Psyr_2261	0.30	-0.8
2,626,145	-		Psyr_2261	0.36	+0.3
2,626,226	+		Psyr_2261	0.43	-0.2
2,626,227	-		Psyr_2261	0.43	+1.3
2,626,401	+		Psyr_2261	0.58	+0.4
2,626,455	+		Psyr_2261	0.63	-1.3
2,626,456	-		Psyr_2261	0.63	+0.3
2,626,680	-		Psyr_2261	0.82	-1.7
2,626,682	+		Psyr_2261	0.82	-1.6
2,626,682	+		Psyr_2261	0.82	-0.5
2,626,682	+		Psyr_2261	0.82	+0.8
2,626,682	+		Psyr_2261	0.82	-0.6
2,626,682	+		Psyr_2261	0.82	-2.0
2,626,682	+		Psyr_2261	0.82	-1.0
2,626,682	+		Psyr_2261	0.82	+0.8
2,626,683	-		Psyr_2261	0.82	-2.8
2,626,683	-		Psyr_2261	0.82	-1.9
2,626,683	-		Psyr_2261	0.82	+3.5
2,626,683	-		Psyr_2261	0.82	+0.9
2,626,683	-		Psyr_2261	0.82	-1.3
2,626,683	-		Psyr_2261	0.82	+0.5
2,626,683	-		Psyr_2261	0.82	+1.2
2,626,683	-		Psyr_2261	0.82	-0.5
2,626,683	-		Psyr_2261	0.82	+0.0
2,626,683	-		Psyr_2261	0.82	+0.9
2,626,785	+				+0.3
2,626,785	+				-0.3
2,626,840	-				-0.2
2,627,088	+		Psyr_2262	0.14	+1.6
2,628,008	+		Psyr_2262	0.79	-0.2
2,628,173	+				+0.3
2,628,613	+		Psyr_2263	0.30	+0.2
2,628,613	+		Psyr_2263	0.30	-0.4
2,628,614	-		Psyr_2263	0.30	-0.9
2,628,614	-		Psyr_2263	0.30	+1.2
2,628,614	-		Psyr_2263	0.30	-0.3
2,628,614	-		Psyr_2263	0.30	-0.6
2,628,677	-		Psyr_2263	0.36	-0.3
2,628,677	-		Psyr_2263	0.36	-0.3
2,628,677	-		Psyr_2263	0.36	+1.1
2,629,075	-		Psyr_2263	0.75	-1.6
2,629,075	-		Psyr_2263	0.75	-1.5
2,629,124	+		Psyr_2263	0.80	-0.6
2,629,257	+				-0.4
2,629,257	+				+0.4
2,629,257	+				+0.2
2,629,258	-				+1.5
2,629,258	-				+1.3