Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2259

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,622,543	+				+1.6
2,622,676	+				+1.2
2,622,677	-				-0.4
2,622,677	-				-1.6
2,622,677	-				-0.6
2,622,677	-				-2.1
2,622,677	-				-0.4
2,622,677	-				+1.6
2,622,791	+				+2.3
2,622,791	+				+1.0
2,622,791	+				-0.2
2,622,792	-				-1.3
2,622,792	-				+0.3
2,623,267	+		Psyr_2258	0.87	+1.2
2,623,378	+				-1.2
2,623,552	+		Psyr_2259	0.29	-1.5
2,623,846	+		Psyr_2259	0.69	-1.0
2,623,998	+		Psyr_2259	0.89	-0.5
2,623,999	-		Psyr_2259	0.89	-1.5
2,624,048	+				-0.9
2,624,048	+				+0.1
2,624,048	+				+0.6
2,624,048	+				+0.0
2,624,049	-				-1.7
2,624,067	+				+1.4
2,624,068	-				-0.6
2,624,402	+		Psyr_2260	0.20	+0.6
2,624,402	+		Psyr_2260	0.20	+1.2
2,624,402	+		Psyr_2260	0.20	+0.8
2,624,403	-		Psyr_2260	0.20	+1.7
2,624,403	-		Psyr_2260	0.20	+0.2
2,624,403	-		Psyr_2260	0.20	+0.2
2,624,403	-				-2.7
2,624,472	+		Psyr_2260	0.25	+1.8
2,624,495	+		Psyr_2260	0.26	+0.2
2,624,495	+		Psyr_2260	0.26	+0.8
2,624,880	+		Psyr_2260	0.52	+1.7
2,624,880	+		Psyr_2260	0.52	-0.1
2,624,881	-		Psyr_2260	0.52	-0.8
2,624,882	+		Psyr_2260	0.52	+0.7
2,624,882	+		Psyr_2260	0.52	-0.9
2,624,882	+		Psyr_2260	0.52	+0.4
2,624,882	+		Psyr_2260	0.52	+0.9
2,624,883	-		Psyr_2260	0.52	-1.8
2,624,883	-		Psyr_2260	0.52	+3.5
2,624,965	+		Psyr_2260	0.57	-0.6