Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2231

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,593,478	+		Psyr_2230	0.48	+0.6
2,593,479	-		Psyr_2230	0.48	+0.4
2,593,495	-		Psyr_2230	0.49	-1.5
2,593,510	+		Psyr_2230	0.50	-0.6
2,593,694	+		Psyr_2230	0.65	+0.3
2,593,694	+		Psyr_2230	0.65	-0.1
2,593,694	+		Psyr_2230	0.65	+0.9
2,593,695	-		Psyr_2230	0.65	-0.1
2,593,695	-		Psyr_2230	0.65	-0.7
2,593,695	-		Psyr_2230	0.65	-0.0
2,593,698	+		Psyr_2230	0.65	+0.1
2,593,729	+		Psyr_2230	0.67	+0.0
2,593,730	-		Psyr_2230	0.67	-0.4
2,593,730	-		Psyr_2230	0.67	-0.1
2,593,808	+		Psyr_2230	0.73	-0.7
2,593,808	+		Psyr_2230	0.73	-0.2
2,593,808	+		Psyr_2230	0.73	-0.3
2,593,809	-		Psyr_2230	0.73	+0.2
2,594,000	+		Psyr_2230	0.88	-1.5
2,594,001	-		Psyr_2230	0.88	+0.3
2,594,001	-		Psyr_2230	0.88	-2.5
2,594,179	+				+0.4
2,594,179	+				+2.8
2,594,180	-				-2.7
2,594,246	-				+0.2
2,594,246	-				-2.0
2,594,249	+				+1.8
2,594,249	+				-1.6
2,594,249	+				+0.4
2,594,250	-				+2.0
2,594,250	-				-0.9
2,594,276	+				+1.7
2,594,654	+		Psyr_2231	0.45	-0.1
2,594,655	-		Psyr_2231	0.45	+1.2
2,594,705	+		Psyr_2231	0.52	-2.7
2,594,706	-		Psyr_2231	0.52	+0.1
2,594,804	+		Psyr_2231	0.65	-1.1
2,594,843	+		Psyr_2231	0.70	-0.4
2,594,843	+		Psyr_2231	0.70	-0.6
2,594,844	-		Psyr_2231	0.71	-2.9
2,594,844	-		Psyr_2231	0.71	-0.6
2,594,844	-		Psyr_2231	0.71	-1.5
2,595,420	+		Psyr_2232	0.27	-0.5
2,595,420	+		Psyr_2232	0.27	-1.3
2,595,420	+		Psyr_2232	0.27	+0.9
2,595,421	-		Psyr_2232	0.27	-0.3
2,595,822	+		Psyr_2232	0.58	-0.8
2,595,823	-		Psyr_2232	0.58	-1.8
2,595,835	+		Psyr_2232	0.59	-1.1
2,595,836	-		Psyr_2232	0.59	+0.7