Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2121

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,477,904	+		Psyr_2119	0.40	+0.1
2,477,904	+		Psyr_2119	0.40	-0.4
2,477,905	-		Psyr_2119	0.40	+1.5
2,477,905	-		Psyr_2119	0.40	+4.1
2,477,905	-		Psyr_2119	0.40	+0.1
2,477,905	-		Psyr_2119	0.40	-0.3
2,477,994	-		Psyr_2119	0.48	-0.3
2,478,015	+		Psyr_2119	0.50	-0.2
2,478,015	+		Psyr_2119	0.50	+2.4
2,478,016	-		Psyr_2119	0.50	+0.7
2,478,016	-		Psyr_2119	0.50	+0.7
2,478,093	+		Psyr_2119	0.57	+1.1
2,478,192	+		Psyr_2119	0.67	-1.5
2,478,192	+		Psyr_2119	0.67	-0.1
2,478,192	+		Psyr_2119	0.67	+0.2
2,478,193	-		Psyr_2119	0.67	+0.3
2,478,193	-		Psyr_2119	0.67	+0.7
2,478,193	-		Psyr_2119	0.67	-0.6
2,478,193	-		Psyr_2119	0.67	+0.7
2,478,321	-		Psyr_2119	0.79	+0.1
2,478,327	+		Psyr_2119	0.79	+3.4
2,478,328	-		Psyr_2119	0.79	-0.4
2,478,336	+		Psyr_2119	0.80	-2.0
2,478,336	+		Psyr_2119	0.80	+1.1
2,478,336	+		Psyr_2119	0.80	+3.2
2,478,336	+		Psyr_2119	0.80	-0.1
2,478,336	+		Psyr_2119	0.80	+1.1
2,478,336	+		Psyr_2119	0.80	-1.2
2,478,336	+		Psyr_2119	0.80	-1.5
2,478,336	+		Psyr_2119	0.80	-0.1
2,478,336	+		Psyr_2119	0.80	+1.4
2,478,337	-		Psyr_2119	0.80	+0.1
2,478,337	-		Psyr_2119	0.80	-2.8
2,478,337	-		Psyr_2119	0.80	-1.4
2,478,337	-		Psyr_2119	0.80	+1.4
2,478,337	-		Psyr_2119	0.80	+0.1
2,478,337	-		Psyr_2119	0.80	-1.7
2,478,337	-		Psyr_2119	0.80	+1.8
2,478,337	-		Psyr_2119	0.80	-1.0
2,478,337	-		Psyr_2119	0.80	-0.8
2,478,408	+		Psyr_2119	0.87	-1.5
2,478,409	-		Psyr_2119	0.87	-0.4
2,478,469	+				-1.2
2,478,480	+				+0.3
2,478,480	+				-1.9
2,478,569	-				-0.7
2,479,205	+		Psyr_2121	0.33	+0.6
2,479,205	+		Psyr_2121	0.33	+1.1
2,479,306	+		Psyr_2121	0.44	+0.5
2,479,307	-		Psyr_2121	0.44	+0.9
2,479,328	+		Psyr_2121	0.46	+0.8
2,479,402	+		Psyr_2121	0.54	-0.6
2,479,402	+		Psyr_2121	0.54	-1.9
2,479,403	-		Psyr_2121	0.55	+0.2
2,479,403	-		Psyr_2121	0.55	+1.0
2,479,938	-				+3.1
2,479,938	-				+0.5
2,480,035	+		Psyr_2122	0.10	+0.8
2,480,035	+		Psyr_2122	0.10	+0.8
2,480,035	+		Psyr_2122	0.10	-1.8
2,480,197	-		Psyr_2122	0.33	-0.6
2,480,197	-		Psyr_2122	0.33	-0.1
2,480,228	-		Psyr_2122	0.37	+1.2
2,480,308	+		Psyr_2122	0.48	+0.4
2,480,309	-		Psyr_2122	0.48	+0.3
2,480,375	-		Psyr_2122	0.57	+0.3
2,480,375	-		Psyr_2122	0.57	+0.1
2,480,405	-		Psyr_2122	0.61	+2.7
2,480,500	+		Psyr_2122	0.75	-0.3
2,480,500	+		Psyr_2122	0.75	+1.2