Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2055

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,400,334	+		Psyr_2054	0.13	+0.5
2,400,334	+		Psyr_2054	0.13	+0.4
2,400,335	-		Psyr_2054	0.13	+0.2
2,400,448	+		Psyr_2054	0.24	-1.6
2,400,449	-		Psyr_2054	0.25	-1.4
2,400,621	+		Psyr_2054	0.43	-0.5
2,400,757	+		Psyr_2054	0.57	-0.4
2,400,758	-		Psyr_2054	0.57	+0.3
2,400,857	-		Psyr_2054	0.67	-1.3
2,400,874	+		Psyr_2054	0.69	-2.9
2,400,874	+		Psyr_2054	0.69	+0.0
2,400,875	-		Psyr_2054	0.69	-0.8
2,400,917	-		Psyr_2054	0.73	+1.0
2,401,401	+		Psyr_2055	0.12	-0.0
2,401,546	-		Psyr_2055	0.19	-0.2
2,401,891	-		Psyr_2055	0.36	+1.3
2,401,960	+		Psyr_2055	0.39	+1.6
2,402,002	-		Psyr_2055	0.42	-0.5
2,402,268	+		Psyr_2055	0.55	+1.8
2,402,307	+		Psyr_2055	0.57	+1.1
2,402,307	+		Psyr_2055	0.57	-1.3
2,402,307	+		Psyr_2055	0.57	+0.1
2,402,413	-		Psyr_2055	0.62	-0.8
2,402,550	+		Psyr_2055	0.69	+0.9
2,402,743	-		Psyr_2055	0.78	+0.0
2,402,743	-		Psyr_2055	0.78	+1.3
2,402,789	-		Psyr_2055	0.81	+0.4
2,402,967	-		Psyr_2055	0.90	+0.6
2,402,967	-		Psyr_2055	0.90	+0.4
2,403,012	+				+0.2
2,403,012	+				-0.1
2,403,012	+				+0.8
2,403,313	+		Psyr_2056	0.15	-0.8
2,403,314	-		Psyr_2056	0.15	-3.2
2,403,314	-		Psyr_2056	0.15	+0.6
2,403,317	+		Psyr_2056	0.15	-1.0
2,403,343	+		Psyr_2056	0.19	-1.8
2,403,727	+		Psyr_2056	0.69	-1.2
2,403,727	+		Psyr_2056	0.69	+0.8
2,403,728	-		Psyr_2056	0.69	+2.6
2,403,732	+		Psyr_2056	0.70	-2.3
2,403,732	+		Psyr_2056	0.70	-0.8
2,403,901	+				+1.1
2,403,901	+				-2.4
2,403,901	+				+0.0
2,403,902	-				+0.1
2,404,012	+				+0.3
2,404,031	+				-0.3
2,404,032	-				-1.6
2,404,032	-				+0.5