Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2053

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,398,315	+				+3.4
2,398,325	+				+0.7
2,398,326	-				+0.5
2,398,326	-				+0.6
2,398,641	+				-0.3
2,398,641	+				+1.4
2,398,641	+				+0.6
2,398,642	-				+0.1
2,398,642	-				+1.1
2,398,642	-				+0.9
2,398,642	-				-1.1
2,398,642	-				+0.2
2,398,642	-				+1.1
2,398,642	-				-0.1
2,398,642	-				-3.6
2,398,642	-				-0.8
2,398,642	-				-1.1
2,398,688	+				-0.1
2,398,694	-				+0.2
2,398,730	-				-0.2
2,398,730	-				-0.1
2,398,803	+				-0.5
2,399,028	+				-0.1
2,399,028	+				-1.4
2,399,028	+				-1.7
2,399,028	+				-0.2
2,399,051	+				-0.7
2,399,051	+				+1.1
2,399,052	-				+1.3
2,399,192	-				+1.1
2,399,247	+				+2.3
2,399,480	+		Psyr_2053	0.20	-1.9
2,399,481	-		Psyr_2053	0.20	+0.4
2,399,960	+		Psyr_2053	0.72	+1.1
2,399,960	+		Psyr_2053	0.72	-0.0
2,399,961	-		Psyr_2053	0.72	+0.9
2,399,961	-		Psyr_2053	0.72	-0.2
2,399,961	-		Psyr_2053	0.72	+0.6
2,399,961	-		Psyr_2053	0.72	+0.1
2,400,083	+		Psyr_2053	0.85	+0.8
2,400,083	+		Psyr_2053	0.85	-2.3
2,400,084	-		Psyr_2053	0.85	+2.6
2,400,084	-		Psyr_2053	0.85	+0.6
2,400,084	-		Psyr_2053	0.85	+1.1
2,400,084	-		Psyr_2053	0.85	+1.6
2,400,334	+		Psyr_2054	0.13	+0.5
2,400,334	+		Psyr_2054	0.13	+0.4
2,400,335	-		Psyr_2054	0.13	+0.2
2,400,448	+		Psyr_2054	0.24	-1.6
2,400,449	-		Psyr_2054	0.25	-1.4
2,400,621	+		Psyr_2054	0.43	-0.5
2,400,757	+		Psyr_2054	0.57	-0.4
2,400,758	-		Psyr_2054	0.57	+0.3
2,400,857	-		Psyr_2054	0.67	-1.3
2,400,874	+		Psyr_2054	0.69	-2.9
2,400,874	+		Psyr_2054	0.69	+0.0
2,400,875	-		Psyr_2054	0.69	-0.8
2,400,917	-		Psyr_2054	0.73	+1.0