Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2039

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,367,359	-				-0.9
2,367,359	-				-2.3
2,367,399	-				+1.0
2,367,399	-				-0.5
2,367,464	+				+0.2
2,367,464	+				+3.4
2,367,464	+				+0.4
2,367,464	+				-0.1
2,367,464	+				-0.5
2,367,464	+				+0.3
2,367,465	-				+0.2
2,367,465	-				+0.0
2,367,740	+		Psyr_2038	0.40	-0.5
2,367,741	-		Psyr_2038	0.40	-0.7
2,367,763	+		Psyr_2038	0.43	+1.2
2,367,795	-		Psyr_2038	0.47	+0.0
2,367,801	+		Psyr_2038	0.48	-0.6
2,367,850	+		Psyr_2038	0.54	+0.6
2,367,851	-		Psyr_2038	0.54	-1.2
2,367,903	+		Psyr_2038	0.61	-1.8
2,367,903	+		Psyr_2038	0.61	-0.8
2,367,989	+		Psyr_2038	0.73	+1.3
2,368,049	+		Psyr_2038	0.81	-0.1
2,368,049	+		Psyr_2038	0.81	-0.3
2,368,050	-		Psyr_2038	0.81	+0.8
2,368,050	-		Psyr_2038	0.81	+0.7
2,368,116	+				+1.0
2,368,116	+				+1.8
2,368,117	-				-0.9
2,368,117	-				+0.0
2,368,117	-				-3.3
2,368,118	+				-0.5
2,368,118	+				-1.3
2,368,119	-				+1.0
2,368,119	-				-1.8
2,368,119	-				+1.5
2,368,119	-				-0.4
2,368,119	-				+0.2
2,368,119	-				-0.7
2,368,120	+				-1.4
2,368,120	+				+0.4
2,368,120	+				+0.7
2,368,120	+				-0.2
2,368,120	+				-0.9
2,368,120	+				-1.5
2,368,121	-				+0.0
2,368,121	-				-0.4
2,368,121	-				+2.5
2,368,121	-				+0.6
2,368,121	-				-0.1
2,368,121	-				-3.0
2,368,121	-				-1.3
2,368,121	-				-1.1
2,368,121	-				+1.1
2,368,121	-				-1.3
2,368,121	-				+0.3
2,368,121	-				-0.5
2,368,121	-				-1.0
2,368,121	-				-0.3
2,368,121	-				-0.5
2,368,198	+				-0.9
2,368,205	+				+0.1
2,368,205	+				-0.5
2,368,206	-				+0.2
2,368,234	+				-0.2
2,368,262	-				-1.0
2,368,271	+				-1.3
2,368,296	+				-0.9
2,368,296	+				-0.5
2,368,296	+				-0.7
2,368,297	-				+0.6
2,368,297	-				+0.5
2,368,322	+				-1.1
2,368,322	+				+0.4
2,368,322	+				-0.8
2,368,322	+				-0.4
2,368,322	+				-2.1
2,368,323	-				+0.0
2,368,323	-				+2.2
2,368,323	-				-0.9
2,368,323	-				-1.8
2,368,323	-				+0.0
2,368,371	+		Psyr_2039	0.13	+1.7
2,368,375	-		Psyr_2039	0.14	+0.4
2,368,420	-		Psyr_2039	0.22	+3.4
2,368,725	-		Psyr_2039	0.77	-2.0
2,368,816	+				-0.5
2,368,870	+				+1.0
2,368,887	+				+0.6
2,368,887	+				-0.2
2,368,899	+				-0.4
2,368,899	+				+1.8
2,368,903	+				-0.5
2,368,969	+				-1.7
2,369,018	+				-1.4
2,369,019	-				-0.9
2,369,038	+				-0.2
2,369,059	+				+0.2
2,369,130	-				-0.8
2,369,209	+				+0.3
2,369,227	+				+2.0
2,369,227	+				+0.5
2,369,227	+				+2.2
2,369,227	+				+2.8
2,369,227	+				+0.0
2,369,227	+				+0.7
2,369,227	+				+0.8
2,369,228	-				-0.4
2,369,228	-				+0.5
2,369,228	-				-0.8
2,369,228	-				+0.2
2,369,228	-				+0.3
2,369,228	-				-0.8
2,369,228	-				+0.3
2,369,228	-				-0.1
2,369,231	+				-0.3
2,369,231	+				+3.6
2,369,231	+				-1.6
2,369,232	-				+1.8
2,369,232	-				-1.7
2,369,232	-				+0.0
2,369,269	-				+0.3
2,369,269	-				-2.9
2,369,390	+				+0.7
2,369,390	+				+0.7
2,369,390	+				+0.7
2,369,390	+				-0.5
2,369,391	-				+2.8
2,369,391	-				-0.3
2,369,391	-				-0.6
2,369,460	-				+1.9
2,369,632	-				+0.2
2,369,647	+				-0.7
2,369,657	-				-3.4
2,369,701	+				+1.1
2,369,701	+				-0.2
2,369,701	+				+0.0
2,369,701	+				-0.2
2,369,701	+				+2.5
2,369,701	+				+2.6
2,369,702	-				+1.1
2,369,702	-				+1.0
2,369,702	-				+2.6
2,369,702	-				-1.3
2,369,702	-				-0.2
2,369,702	-				+0.7
2,369,705	+				+0.0
2,369,705	+				+0.2
2,369,705	+				+1.3
2,369,705	+				+0.0
2,369,706	-				+0.3
2,369,706	-				+0.5
2,369,706	-				+0.3
2,369,706	-				+1.8