Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1953

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,236,633	+		Psyr_1951	0.71	+0.3
2,236,686	-		Psyr_1951	0.77	+0.0
2,236,757	+		Psyr_1951	0.85	+0.4
2,236,757	+		Psyr_1951	0.85	-0.3
2,236,757	+		Psyr_1951	0.85	+1.5
2,236,757	+		Psyr_1951	0.85	+0.8
2,236,758	-		Psyr_1951	0.85	+1.0
2,236,763	+		Psyr_1951	0.85	+1.6
2,236,763	+		Psyr_1951	0.85	-1.6
2,236,763	+		Psyr_1951	0.85	+0.0
2,236,763	+		Psyr_1951	0.85	-0.8
2,236,763	+		Psyr_1951	0.85	-0.2
2,236,764	-		Psyr_1951	0.85	+0.2
2,236,766	+		Psyr_1951	0.86	-0.5
2,236,780	-		Psyr_1951	0.87	-3.6
2,236,893	+				+0.1
2,236,893	+				+0.0
2,236,894	-				+0.9
2,236,894	-				-0.6
2,236,894	-				-0.6
2,237,138	-		Psyr_1952	0.36	+0.9
2,237,443	+		Psyr_1952	0.90	-0.3
2,237,444	-		Psyr_1952	0.90	-1.1
2,237,444	-		Psyr_1952	0.90	+1.5
2,237,444	-		Psyr_1952	0.90	+1.0
2,237,444	-		Psyr_1952	0.90	-0.3
2,237,480	+				+0.8
2,237,481	-				+0.4
2,237,481	-				-0.4
2,237,481	-				-0.7
2,237,566	-		Psyr_1953	0.20	-2.2
2,237,566	-		Psyr_1953	0.20	+0.0
2,237,566	-		Psyr_1953	0.20	-1.7
2,238,056	+				-1.3
2,238,057	-		Psyr_1954	0.42	+1.4
2,238,495	-		Psyr_1955	0.10	-1.3
2,238,538	-		Psyr_1955	0.14	-0.5