Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1937

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,209,206	+		Psyr_1936	0.14	+1.4
2,209,206	+		Psyr_1936	0.14	+0.4
2,209,536	+		Psyr_1936	0.47	-1.8
2,209,536	+		Psyr_1936	0.47	+2.0
2,209,665	+		Psyr_1936	0.59	-0.6
2,209,897	-		Psyr_1936	0.82	-1.2
2,209,949	+		Psyr_1936	0.87	+3.0
2,209,949	+		Psyr_1936	0.87	-1.0
2,209,950	-				+3.0
2,209,950	-		Psyr_1936	0.87	+0.0
2,209,950	-		Psyr_1936	0.87	-0.6
2,209,950	-		Psyr_1936	0.87	+0.2
2,210,014	+				-1.4
2,210,014	+				+2.1
2,210,014	+				+0.0
2,210,014	+				-2.0
2,210,014	+				+1.1
2,210,015	-				+3.0
2,210,015	-				-0.5
2,210,015	-				+0.7
2,210,015	-				-2.2
2,210,015	-				-0.4
2,210,015	-				-0.3
2,210,015	-				-0.6
2,210,015	-				-0.1
2,210,015	-				+1.0
2,210,015	-				-0.5
2,210,247	+		Psyr_1937	0.13	-0.1
2,210,248	-		Psyr_1937	0.13	-0.1
2,210,248	-		Psyr_1937	0.13	-1.8
2,210,248	-		Psyr_1937	0.13	-0.6
2,210,326	-		Psyr_1937	0.31	-1.6
2,210,619	+				+0.6
2,210,620	-				+1.0
2,210,696	+		Psyr_1938	0.16	+0.3
2,210,697	-		Psyr_1938	0.16	-1.5
2,210,697	-		Psyr_1938	0.16	+0.7
2,210,697	-		Psyr_1938	0.16	+1.0
2,210,698	+		Psyr_1938	0.16	-1.6
2,210,698	+		Psyr_1938	0.16	-0.9
2,210,699	-		Psyr_1938	0.17	-1.6
2,210,699	-		Psyr_1938	0.17	-0.3
2,210,699	-		Psyr_1938	0.17	-2.1
2,210,699	-		Psyr_1938	0.17	+1.4
2,210,848	+		Psyr_1938	0.49	-0.8
2,210,848	+		Psyr_1938	0.49	+0.0
2,210,849	-		Psyr_1938	0.49	-1.5
2,210,863	-		Psyr_1938	0.52	+2.8
2,211,603	-		Psyr_1939	0.22	+1.4