Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1824

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,103,967	+		Psyr_1823	0.47	-1.3
2,103,968	-		Psyr_1823	0.47	-1.8
2,103,968	-		Psyr_1823	0.47	+2.6
2,103,968	-		Psyr_1823	0.47	+0.2
2,104,244	-		Psyr_1823	0.64	-0.8
2,104,258	+		Psyr_1823	0.64	+0.5
2,104,259	-		Psyr_1823	0.65	-1.1
2,104,259	-		Psyr_1823	0.65	-0.3
2,104,259	-		Psyr_1823	0.65	+0.2
2,104,642	+		Psyr_1823	0.87	+1.2
2,104,643	-		Psyr_1823	0.87	-0.1
2,104,753	+				-0.2
2,104,753	+				-0.5
2,104,753	+				+2.0
2,104,865	-				+1.5
2,104,918	+				+2.0
2,104,918	+				+0.7
2,104,918	+				+1.8
2,104,919	-				-0.5
2,104,927	-				-0.2
2,104,972	+				+1.6
2,104,972	+				-0.2
2,104,972	+				+1.0
2,104,972	+				+1.0
2,104,972	+				+1.9
2,104,973	-				-0.8
2,104,973	-				+1.5
2,105,174	-		Psyr_1824	0.28	-0.5
2,105,174	-		Psyr_1824	0.28	-0.1
2,105,174	-		Psyr_1824	0.28	-1.0
2,105,174	-		Psyr_1824	0.28	-0.5
2,105,174	-		Psyr_1824	0.28	+2.4
2,105,282	-		Psyr_1824	0.42	-0.2
2,105,398	+		Psyr_1824	0.56	-3.0
2,105,399	-		Psyr_1824	0.56	-1.9
2,105,438	-		Psyr_1824	0.61	-0.8
2,105,438	-		Psyr_1824	0.61	-1.0
2,105,480	+		Psyr_1824	0.67	+1.0
2,105,670	+				+0.5
2,105,671	-				+2.7
2,105,724	-				-1.6
2,105,756	-				-0.5
2,105,756	-				+1.2
2,105,765	-				+0.0