Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1802

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,074,957	+		Psyr_1801	0.43	-2.0
2,075,218	+		Psyr_1801	0.69	-0.5
2,075,218	+		Psyr_1801	0.69	+0.4
2,075,219	-		Psyr_1801	0.69	-0.3
2,075,428	+		Psyr_1801	0.90	+1.2
2,075,428	+		Psyr_1801	0.90	+2.0
2,075,429	-		Psyr_1801	0.90	+1.8
2,075,429	-		Psyr_1801	0.90	-1.1
2,075,429	-		Psyr_1801	0.90	+0.0
2,075,469	+				-0.1
2,075,469	+				+2.2
2,075,470	-				-0.5
2,075,532	-				-2.8
2,075,548	+				-0.2
2,075,549	-				-0.9
2,075,571	+				-2.0
2,075,571	+				-0.6
2,075,572	-				-1.1
2,075,616	+				-0.3
2,075,761	+				+0.3
2,076,147	+		Psyr_1802	0.85	+1.6
2,076,147	+		Psyr_1802	0.85	+3.0
2,076,147	+		Psyr_1802	0.85	-0.4
2,076,148	-		Psyr_1802	0.85	-0.4
2,076,214	+				+0.7
2,076,214	+				+0.6
2,076,214	+				-0.3
2,076,214	+				+0.3
2,076,214	+				-1.3
2,076,215	-				-0.2
2,076,215	-				-1.1
2,076,215	-				+0.2
2,076,215	-				-1.7
2,076,215	-				+0.7
2,076,215	-				+0.1
2,076,215	-				-1.0
2,076,351	-				-1.3
2,076,392	+				-0.6
2,076,684	-		Psyr_1803	0.38	-0.7
2,076,963	+		Psyr_1803	0.67	+0.2