Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1774

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
2,019,674	-		Psyr_1773	0.46	+0.5
2,019,829	+		Psyr_1773	0.56	-0.1
2,019,829	+		Psyr_1773	0.56	-0.3
2,019,830	-		Psyr_1773	0.56	-0.2
2,019,830	-		Psyr_1773	0.56	-0.1
2,020,258	+		Psyr_1773	0.82	-0.2
2,020,258	+		Psyr_1773	0.82	+0.2
2,020,258	+		Psyr_1773	0.82	+0.8
2,020,258	+		Psyr_1773	0.82	+1.1
2,020,259	-		Psyr_1773	0.82	+0.3
2,020,259	-		Psyr_1773	0.82	-0.7
2,020,259	-		Psyr_1773	0.82	+0.2
2,020,453	-				+0.4
2,020,453	-				+0.3
2,020,453	-				-0.3
2,020,539	-				-1.5
2,020,539	-				-0.8
2,020,569	+				+0.1
2,020,611	+				-0.5
2,020,612	-				-0.5
2,020,612	-				-1.3
2,020,674	+				+0.1
2,020,852	+		Psyr_1774	0.17	-1.8
2,020,864	+		Psyr_1774	0.18	-0.5
2,020,864	+		Psyr_1774	0.18	+0.1
2,020,864	+		Psyr_1774	0.18	-0.5
2,020,865	-		Psyr_1774	0.18	-1.6
2,020,865	-		Psyr_1774	0.18	+0.9
2,020,904	+		Psyr_1774	0.22	-0.5
2,021,571	+		Psyr_1774	0.84	-1.2
2,021,758	+				-0.0
2,021,758	+				+0.2
2,021,759	-				+0.7
2,022,094	+		Psyr_1775	0.28	-1.2
2,022,094	+		Psyr_1775	0.28	+1.2
2,022,095	-		Psyr_1775	0.28	-0.5
2,022,365	-		Psyr_1775	0.61	-0.0
2,022,365	-		Psyr_1775	0.61	-0.1
2,022,365	-		Psyr_1775	0.61	-2.3
2,022,376	+		Psyr_1775	0.63	+0.7
2,022,377	-		Psyr_1775	0.63	-2.8
2,022,468	+		Psyr_1775	0.74	+0.3
2,022,468	+		Psyr_1775	0.74	+0.1
2,022,469	-		Psyr_1775	0.74	-0.4
2,022,529	+		Psyr_1775	0.81	+0.1
2,022,529	+		Psyr_1775	0.81	-0.3
2,022,529	+		Psyr_1775	0.81	-0.5
2,022,530	-		Psyr_1775	0.81	-1.2
2,022,530	-		Psyr_1775	0.81	-0.9
2,022,530	-		Psyr_1775	0.81	-0.8
2,022,699	+				+1.1
2,022,699	+				-0.3
2,022,699	+				-0.7
2,022,700	-				-1.8
2,022,700	-				+0.9
2,022,703	+				-2.4
2,022,703	+				-1.3
2,022,704	-				+1.4
2,022,704	-				-2.9
2,022,704	-				-0.9
2,022,711	+				-0.2
2,022,711	+				+0.5