Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1277

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
1,441,735	+				-1.7
1,441,790	+				-0.4
1,441,790	+				+0.6
1,441,790	+				-1.5
1,441,955	+		Psyr_1276	0.39	+1.0
1,441,955	+		Psyr_1276	0.39	-0.2
1,441,955	+		Psyr_1276	0.39	+0.4
1,441,955	+		Psyr_1276	0.39	-0.4
1,441,955	+		Psyr_1276	0.39	-2.7
1,441,955	+		Psyr_1276	0.39	-1.2
1,441,956	-		Psyr_1276	0.39	-1.3
1,441,956	-		Psyr_1276	0.39	+0.2
1,441,956	-		Psyr_1276	0.39	-1.4
1,441,956	-		Psyr_1276	0.39	-0.5
1,441,956	-				-2.4
1,441,956	-		Psyr_1276	0.39	+0.5
1,441,956	-		Psyr_1276	0.39	+0.3
1,441,956	-		Psyr_1276	0.39	-3.4
1,441,956	-		Psyr_1276	0.39	+0.5
1,441,956	-		Psyr_1276	0.39	-1.5
1,442,102	-		Psyr_1276	0.71	-0.7
1,442,108	-		Psyr_1276	0.72	+0.1
1,442,108	-		Psyr_1276	0.72	-1.0
1,442,108	-		Psyr_1276	0.72	-1.4
1,442,108	-		Psyr_1276	0.72	-0.8
1,442,108	-		Psyr_1276	0.72	-1.8
1,442,108	-		Psyr_1276	0.72	+0.0
1,442,302	-				-0.4
1,442,386	+				-1.7
1,442,387	-				+0.5
1,442,764	-		Psyr_1277	0.36	-0.8
1,443,030	+		Psyr_1277	0.58	-1.6
1,443,031	-		Psyr_1277	0.58	-0.2
1,443,514	+				-0.5
1,443,514	+				+1.2
1,443,515	-				-0.9
1,443,515	-				+1.4
1,443,515	-				+0.3
1,443,515	-				-1.0
1,443,515	-				+1.2
1,443,537	-				+1.1
1,443,537	-				-0.4
1,443,614	-				-2.0
1,443,675	+				+1.2
1,443,675	+				-0.6
1,443,675	+				+1.0
1,443,676	-				+0.3
1,443,765	+		Psyr_1278	0.12	+1.3
1,443,765	+		Psyr_1278	0.12	+0.1
1,443,766	-		Psyr_1278	0.12	-0.5
1,443,766	-		Psyr_1278	0.12	+1.0
1,443,766	-		Psyr_1278	0.12	-1.8
1,443,787	-		Psyr_1278	0.13	+0.7
1,443,922	+		Psyr_1278	0.23	+0.2
1,443,922	+		Psyr_1278	0.23	-2.1
1,443,923	-		Psyr_1278	0.23	+0.2
1,444,067	-		Psyr_1278	0.34	-1.7
1,444,115	-		Psyr_1278	0.37	+0.5
1,444,116	+		Psyr_1278	0.37	-0.6
1,444,116	+		Psyr_1278	0.37	-0.8
1,444,116	+		Psyr_1278	0.37	-0.1
1,444,116	+		Psyr_1278	0.37	+0.6
1,444,117	-		Psyr_1278	0.38	-0.5
1,444,117	-		Psyr_1278	0.38	+1.2
1,444,117	-		Psyr_1278	0.38	-1.3
1,444,117	-		Psyr_1278	0.38	+0.5
1,444,117	-		Psyr_1278	0.38	+0.2
1,444,117	-		Psyr_1278	0.38	+1.5
1,444,117	-		Psyr_1278	0.38	-0.2
1,444,117	-		Psyr_1278	0.38	-0.1
1,444,117	-		Psyr_1278	0.38	-0.3
1,444,129	-		Psyr_1278	0.38	+0.9
1,444,269	+		Psyr_1278	0.49	+0.9
1,444,269	+		Psyr_1278	0.49	-2.1
1,444,269	+		Psyr_1278	0.49	+0.1
1,444,269	+		Psyr_1278	0.49	+2.2
1,444,269	+		Psyr_1278	0.49	-0.7
1,444,270	-		Psyr_1278	0.49	-0.8
1,444,270	-		Psyr_1278	0.49	-0.9
1,444,270	-		Psyr_1278	0.49	-1.2
1,444,270	-		Psyr_1278	0.49	-0.2