Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1018

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
1,150,810	+				+2.5
1,150,889	+				+0.8
1,150,890	-				-0.2
1,150,890	-				-0.3
1,150,890	-				-0.3
1,150,890	-				+1.3
1,150,891	+				+0.4
1,150,891	+				-0.6
1,150,891	+				-1.9
1,150,891	+				-0.9
1,150,891	+				-0.2
1,150,891	+				-4.2
1,150,891	+				+0.9
1,150,891	+				-2.9
1,150,891	+				-1.2
1,150,892	-				-0.9
1,150,892	-				-1.0
1,150,892	-				+1.6
1,150,892	-				-0.7
1,150,892	-				-2.0
1,150,892	-				+0.8
1,151,190	+		Psyr_1017	0.75	-0.2
1,151,190	+		Psyr_1017	0.75	-0.1
1,151,353	+		Psyr_1018	0.28	+0.9
1,151,366	-		Psyr_1018	0.33	-1.7
1,151,366	-		Psyr_1018	0.33	-1.1
1,151,428	+		Psyr_1018	0.53	-1.7
1,151,428	+		Psyr_1018	0.53	-1.4
1,151,428	+		Psyr_1018	0.53	-0.8
1,151,429	-		Psyr_1018	0.54	+0.5
1,151,429	-		Psyr_1018	0.54	-0.9
1,151,429	-		Psyr_1018	0.54	-1.4
1,151,603	+				+0.3
1,151,604	-				+1.5
1,151,690	+		Psyr_1019	0.21	-0.4
1,151,690	+		Psyr_1019	0.21	+0.4
1,151,690	+		Psyr_1019	0.21	-0.7
1,151,690	+		Psyr_1019	0.21	-0.1
1,151,690	+		Psyr_1019	0.21	-1.6
1,151,690	+		Psyr_1019	0.21	+0.1
1,151,691	-		Psyr_1019	0.22	-0.6
1,151,691	-		Psyr_1019	0.22	-0.9
1,151,691	-		Psyr_1019	0.22	+0.4
1,151,691	-		Psyr_1019	0.22	+1.1
1,151,805	-		Psyr_1019	0.52	+1.3
1,151,805	-		Psyr_1019	0.52	-1.6
1,151,856	-		Psyr_1019	0.66	+0.3
1,151,856	-		Psyr_1019	0.66	+3.0
1,151,983	+				-1.2
1,152,065	+		Psyr_1020	0.15	+1.0
1,152,065	+		Psyr_1020	0.15	+1.8
1,152,065	+		Psyr_1020	0.15	-0.8
1,152,065	+		Psyr_1020	0.15	-0.4
1,152,065	+		Psyr_1020	0.15	-0.9
1,152,065	+		Psyr_1020	0.15	-0.2
1,152,065	+		Psyr_1020	0.15	+1.7
1,152,066	-		Psyr_1020	0.15	-0.6
1,152,066	-		Psyr_1020	0.15	+2.0
1,152,066	-		Psyr_1020	0.15	-0.6
1,152,066	-		Psyr_1020	0.15	+0.2
1,152,066	-		Psyr_1020	0.15	+2.2
1,152,066	-		Psyr_1020	0.15	+3.2
1,152,066	-		Psyr_1020	0.15	-0.1
1,152,066	-		Psyr_1020	0.15	-0.7
1,152,066	-		Psyr_1020	0.15	-1.9
1,152,066	-		Psyr_1020	0.15	+0.3
1,152,066	-		Psyr_1020	0.15	-0.7
1,152,066	-		Psyr_1020	0.15	+0.8
1,152,139	-		Psyr_1020	0.28	-0.9
1,152,139	-		Psyr_1020	0.28	+0.1
1,152,278	-		Psyr_1020	0.52	-1.1
1,152,278	-		Psyr_1020	0.52	+0.9
1,152,278	-		Psyr_1020	0.52	+0.7
1,152,298	-		Psyr_1020	0.56	-1.7
1,152,331	+		Psyr_1020	0.62	+1.1
1,152,332	-		Psyr_1020	0.62	+0.5
1,152,418	+		Psyr_1020	0.77	+0.4
1,152,418	+		Psyr_1020	0.77	-0.2
1,152,419	-		Psyr_1020	0.77	+3.5
1,152,419	-		Psyr_1020	0.77	-0.4
1,152,419	-		Psyr_1020	0.77	-2.0
1,152,433	+		Psyr_1020	0.80	-0.3
1,152,433	+		Psyr_1020	0.80	+0.9
1,152,434	-		Psyr_1020	0.80	+0.2
1,152,434	-		Psyr_1020	0.80	+2.5