Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0966

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
1,098,600	-		Psyr_0965	0.31	-1.3
1,098,948	-		Psyr_0965	0.66	+0.1
1,099,024	+		Psyr_0965	0.74	-0.2
1,099,024	+		Psyr_0965	0.74	+0.3
1,099,111	+		Psyr_0965	0.83	-1.1
1,099,111	+		Psyr_0965	0.83	-1.3
1,099,112	-		Psyr_0965	0.83	-0.2
1,099,112	-		Psyr_0965	0.83	-0.8
1,099,112	-		Psyr_0965	0.83	-0.7
1,099,160	+		Psyr_0965	0.88	-1.9
1,099,160	+		Psyr_0965	0.88	+2.4
1,099,160	+		Psyr_0965	0.88	-1.1
1,099,160	+		Psyr_0965	0.88	-0.2
1,099,160	+		Psyr_0965	0.88	-0.2
1,099,160	+		Psyr_0965	0.88	-0.3
1,099,160	+		Psyr_0965	0.88	-0.2
1,099,161	-		Psyr_0965	0.88	-0.5
1,099,161	-		Psyr_0965	0.88	+0.6
1,099,218	-				-0.9
1,099,280	+				-0.6
1,099,280	+				+0.8
1,099,281	-				+2.2
1,099,322	-				-0.0
1,099,331	-				+2.0
1,099,350	+				+2.4
1,099,351	-				-1.7
1,099,463	+				-0.1
1,099,463	+				+1.2
1,099,525	+				+0.5
1,099,525	+				-1.1
1,099,526	-				+0.7
1,099,526	-				-0.6
1,099,526	-				+1.4
1,099,526	-				-0.6
1,099,531	+				+0.9
1,099,531	+				+1.2
1,099,532	-				+0.9
1,099,532	-				+0.3
1,099,546	+				-0.1
1,099,546	+				+1.4
1,099,546	+				+0.3
1,099,547	-				-1.0
1,099,547	-				+0.1
1,099,547	-				+0.6
1,099,547	-				-0.8
1,099,547	-				+0.2
1,099,576	+				-0.0
1,099,576	+				+0.3
1,099,576	+				+0.6
1,099,576	+				-0.8
1,099,576	+				-1.8
1,099,576	+				+1.4
1,099,576	+				-0.8
1,099,576	+				+0.2
1,099,577	-				-0.7
1,099,577	-				+0.2
1,099,577	-				-0.0
1,099,577	-				+0.9
1,099,577	-				+0.1
1,099,577	-				+0.8
1,099,577	-				+0.2
1,099,577	-				+1.2
1,099,592	+				-0.0
1,099,593	-				-0.9
1,099,655	-				+2.2
1,100,050	+		Psyr_0966	0.53	-1.5
1,100,203	+		Psyr_0966	0.70	-2.2
1,100,229	+		Psyr_0966	0.73	-1.1
1,100,229	+		Psyr_0966	0.73	-2.0
1,100,229	+		Psyr_0966	0.73	+0.8
1,100,229	+		Psyr_0966	0.73	+1.6
1,100,229	+		Psyr_0966	0.73	+1.4
1,100,229	+		Psyr_0966	0.73	-3.0
1,100,229	+		Psyr_0966	0.73	-1.0
1,100,229	+		Psyr_0966	0.73	-2.1
1,100,229	+		Psyr_0966	0.73	-0.5
1,100,229	+		Psyr_0966	0.73	+0.2
1,100,230	-		Psyr_0966	0.73	-1.6
1,100,230	-		Psyr_0966	0.73	-0.3
1,100,231	+		Psyr_0966	0.73	-1.3
1,100,231	+		Psyr_0966	0.73	-0.7
1,100,231	+		Psyr_0966	0.73	-0.9
1,100,231	+		Psyr_0966	0.73	-0.7
1,100,232	-		Psyr_0966	0.73	-0.2
1,100,232	-		Psyr_0966	0.73	-0.2
1,100,338	+		Psyr_0966	0.85	-1.6
1,100,338	+		Psyr_0966	0.85	-2.7
1,100,338	+		Psyr_0966	0.85	+0.1
1,100,414	+				-2.5
1,100,414	+				-2.0
1,100,414	+				-0.4
1,100,424	+				-2.5
1,100,424	+				-1.8
1,100,425	-				-0.8
1,100,488	+				+0.5
1,100,488	+				-1.0
1,100,489	-				-2.7
1,100,489	-				+0.8