Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0655

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
743,217	+		Psyr_0654	0.73	-0.6
743,218	-		Psyr_0654	0.73	-0.1
743,218	-		Psyr_0654	0.73	+0.6
743,218	-		Psyr_0654	0.73	-0.6
743,218	-		Psyr_0654	0.73	+0.0
743,231	+		Psyr_0654	0.73	-0.6
743,231	+		Psyr_0654	0.73	+2.3
743,231	+		Psyr_0654	0.73	+0.2
743,232	-		Psyr_0654	0.73	+0.5
743,232	-		Psyr_0654	0.73	+0.3
743,266	-		Psyr_0654	0.75	+0.1
743,266	-		Psyr_0654	0.75	-1.1
743,295	+		Psyr_0654	0.76	+0.9
743,295	+		Psyr_0654	0.76	+1.9
743,295	+		Psyr_0654	0.76	+0.5
743,296	-		Psyr_0654	0.76	+0.5
743,296	-		Psyr_0654	0.76	+0.6
743,307	+		Psyr_0654	0.77	+0.6
743,360	-		Psyr_0654	0.79	-0.4
743,400	+		Psyr_0654	0.81	+0.9
743,615	-				+0.2
743,675	+				-0.3
743,675	+				-1.7
743,675	+				+1.3
743,675	+				-0.8
743,676	-				-1.1
743,676	-				-1.2
743,676	-				-0.8
743,676	-				-1.6
743,839	+				-0.4
743,889	+				+0.9
743,889	+				-0.7
743,890	-				+0.4
743,890	-				-0.3
743,890	-				+0.3
743,890	-				+1.1
743,913	+				-0.2
743,913	+				+0.8
743,913	+				-3.1
743,913	+				-1.1
743,913	+				-0.5
743,913	+				-0.2
743,913	+				+0.3
743,913	+				-0.3
743,913	+				+4.1
743,914	-				+0.6
743,914	-				+0.3
743,914	-				+1.6
743,943	+		Psyr_0655	0.15	+0.8
743,943	+		Psyr_0655	0.15	+0.4
743,944	-		Psyr_0655	0.15	+2.9
743,954	-		Psyr_0655	0.18	+0.5
744,093	+		Psyr_0655	0.55	-2.2
744,094	-		Psyr_0655	0.55	-1.0
744,094	-		Psyr_0655	0.55	+0.5
744,123	+		Psyr_0655	0.62	-1.2
744,123	+		Psyr_0655	0.62	-0.8
744,123	+		Psyr_0655	0.62	+0.7
744,123	+		Psyr_0655	0.62	-1.2
744,123	+		Psyr_0655	0.62	-0.4
744,124	-		Psyr_0655	0.63	-2.6
744,124	-		Psyr_0655	0.63	-2.4
744,124	-		Psyr_0655	0.63	+1.1
744,124	-		Psyr_0655	0.63	-1.3
744,124	-		Psyr_0655	0.63	-0.5
744,124	-		Psyr_0655	0.63	-0.5
744,124	-		Psyr_0655	0.63	-1.8
744,217	+		Psyr_0655	0.87	+0.5
744,273	-				+0.4
744,273	-				+0.3
744,283	+				-0.2
744,283	+				+0.6
744,283	+				-1.0
744,283	+				-1.9
744,283	+				+0.1
744,283	+				-2.3
744,284	-				-0.5
744,284	-				-0.8
744,284	-				+0.3
744,284	-				-0.3
744,301	+				+1.3
744,301	+				+3.6
744,301	+				+0.3
744,301	+				-1.4
744,301	+				+0.7
744,301	+				-0.1
744,301	+				+0.4
744,301	+				-0.6
744,301	+				-1.1
744,301	+				+0.0
744,301	+				+0.9
744,301	+				-0.4
744,301	+				+0.3
744,302	-				-2.3
744,302	-				+0.2
744,302	-				-1.2
744,302	-				-0.5
744,302	-				+0.2
744,302	-				-2.2
744,302	-				-0.1
744,302	-				+1.2
744,302	-				-0.8
744,302	-				-0.4
744,438	-				+0.5
744,438	-				+0.5
744,666	-				+0.0
744,687	+				-0.5
744,687	+				-0.6
744,688	-				+0.3
744,688	-				+2.3
744,732	-				+1.1
744,773	+				+4.1
744,773	+				-0.7
744,774	-				-2.2
744,832	+				-1.2
744,832	+				+0.8
744,832	+				-1.5
744,832	+				-1.9
744,832	+				-0.4
744,832	+				+0.7
744,832	+				-0.7
744,833	-				+0.7
744,833	-				+1.7
744,833	-				+2.1
744,833	-				-0.3
744,833	-				-0.1
744,862	+				+1.1
744,887	+		Psyr_0657	0.10	+0.1
744,887	+		Psyr_0657	0.10	-1.5
744,887	+		Psyr_0657	0.10	+0.7
744,887	+		Psyr_0657	0.10	+1.0
744,887	+		Psyr_0657	0.10	+0.2
744,887	+		Psyr_0657	0.10	+0.3
744,888	-		Psyr_0657	0.10	-0.5
744,888	-		Psyr_0657	0.10	+2.7
744,888	-		Psyr_0657	0.10	+0.2
744,888	-		Psyr_0657	0.10	+2.5
744,888	-		Psyr_0657	0.10	+0.4
744,888	-		Psyr_0657	0.10	+0.3
744,888	-		Psyr_0657	0.10	+0.1
744,888	-		Psyr_0657	0.10	-1.7
744,941	-		Psyr_0657	0.15	+0.8
744,941	-		Psyr_0657	0.15	-1.9
745,224	+		Psyr_0657	0.38	+0.1
745,225	-		Psyr_0657	0.38	-1.3
745,225	-		Psyr_0657	0.38	-0.2