Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_0625

Experiment: KB with Ginkgolide A 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Ginkgolide A 10 mM
713,418	+				+1.1
713,418	+				+0.2
713,418	+				-0.4
713,418	+				-1.5
713,418	+				-0.8
713,418	+				+2.3
713,418	+				-0.5
713,418	+				-2.4
713,418	+				+0.1
713,418	+				+0.7
713,418	+				-1.0
713,418	+				-0.2
713,418	+				-2.6
713,418	+				+0.2
713,418	+				+0.8
713,418	+				+1.0
713,418	+				-0.1
713,418	+				+2.3
713,418	+				+1.2
713,418	+				+0.2
713,418	+				-0.0
713,419	-				-1.4
713,419	-				+0.1
713,419	-				+0.9
713,419	-				-2.0
713,419	-				-1.6
713,419	-				+0.6
713,419	-				+2.5
713,419	-				+0.2
713,419	-				+1.0
713,419	-				+0.3
713,419	-				+0.4
713,419	-				+0.9
713,419	-				+0.0
713,419	-				+0.0
713,419	-				+1.3
713,419	-				+0.3
713,419	-				+0.5
713,419	-				-2.9
713,419	-				-1.5
713,419	-				+0.1
713,419	-				-0.1
713,419	-				-1.2
713,419	-				-0.8
713,419	-				-1.5
713,419	-				+0.1
713,458	+				-0.1
713,458	+				-2.3
713,458	+				+0.5
713,458	+				+0.6
713,458	+				+0.5
713,515	+				-0.7
713,537	+				-0.1
713,537	+				+0.8
713,538	-				+2.9
713,538	-				-1.0
713,538	-				+0.4
713,538	-				+1.3
713,538	-				-0.3
713,553	+				+0.9
713,577	+				-1.3
713,577	+				+0.1
713,578	-				-0.4
713,578	-				+0.8
713,578	-				+0.1
713,631	+				-0.4
713,710	+				+0.1
714,356	-				-0.1
714,373	-				-0.2
714,373	-				+0.3
714,379	-				+1.5
714,379	-				+2.7
714,379	-				+0.1
714,379	-				+0.0
714,379	-				+1.3
714,483	+				-0.1
714,504	+		Psyr_0625	0.11	-0.1
714,505	-		Psyr_0625	0.11	-2.0
714,552	+		Psyr_0625	0.17	-1.0
714,552	+		Psyr_0625	0.17	-0.4
714,553	-		Psyr_0625	0.17	+1.3
714,597	+		Psyr_0625	0.22	-1.5
714,598	-		Psyr_0625	0.22	+2.1
714,773	+		Psyr_0625	0.44	-0.7
714,773	+		Psyr_0625	0.44	-0.0
714,773	+		Psyr_0625	0.44	+0.6
714,773	+		Psyr_0625	0.44	-0.6
714,773	+		Psyr_0625	0.44	+0.4
714,773	+		Psyr_0625	0.44	+0.2
714,773	+		Psyr_0625	0.44	+1.3
714,773	+		Psyr_0625	0.44	-3.3
714,774	-		Psyr_0625	0.44	-1.1
714,774	-		Psyr_0625	0.44	-0.4
714,774	-		Psyr_0625	0.44	+0.9
714,774	-		Psyr_0625	0.44	-0.5
714,780	+		Psyr_0625	0.45	-0.5
714,780	+		Psyr_0625	0.45	-0.9
714,781	-		Psyr_0625	0.45	+0.4
714,806	+		Psyr_0625	0.48	-1.2
715,133	-		Psyr_0625	0.89	-0.8
715,160	+				-1.5
715,160	+				-0.7
715,160	+				+0.1
715,268	+				-1.3
715,268	+				+0.5
715,527	+		Psyr_0626	0.46	+0.8
715,528	-		Psyr_0626	0.46	-0.1
715,552	-		Psyr_0626	0.50	+2.7
715,552	-		Psyr_0626	0.50	-1.2
715,552	-		Psyr_0626	0.50	-0.1
715,552	-		Psyr_0626	0.50	+1.1
715,620	+		Psyr_0626	0.60	+1.1
715,620	+		Psyr_0626	0.60	+0.7
715,620	+		Psyr_0626	0.60	-1.3
715,620	+		Psyr_0626	0.60	-1.5
715,620	+		Psyr_0626	0.60	-0.1
715,620	+		Psyr_0626	0.60	-1.6
715,620	+		Psyr_0626	0.60	+1.0
715,620	+		Psyr_0626	0.60	+0.2
715,620	+		Psyr_0626	0.60	+0.7
715,621	-		Psyr_0626	0.60	-3.1
715,621	-		Psyr_0626	0.60	-1.0
715,621	-		Psyr_0626	0.60	+0.7
715,621	-		Psyr_0626	0.60	+0.0
715,621	-		Psyr_0626	0.60	-0.0
715,621	-		Psyr_0626	0.60	-0.0
715,621	-		Psyr_0626	0.60	-1.0
715,621	-		Psyr_0626	0.60	-0.7
715,621	-		Psyr_0626	0.60	+1.2
715,621	-		Psyr_0626	0.60	-0.5
715,621	-		Psyr_0626	0.60	-0.0
715,794	+		Psyr_0626	0.87	+0.8
715,795	-		Psyr_0626	0.87	-0.7
715,804	+		Psyr_0626	0.89	+2.1
715,805	-		Psyr_0626	0.89	-0.1
715,805	-		Psyr_0626	0.89	-0.6
715,805	-		Psyr_0626	0.89	-0.1
715,805	-		Psyr_0626	0.89	-0.3
715,805	-		Psyr_0626	0.89	+0.2
715,805	-		Psyr_0626	0.89	-1.2
715,805	-		Psyr_0626	0.89	+1.3
715,809	+		Psyr_0626	0.90	-0.6
715,809	+		Psyr_0626	0.90	-0.0
715,809	+		Psyr_0626	0.90	-0.5
715,810	-		Psyr_0626	0.90	+0.3
715,810	-		Psyr_0626	0.90	-0.7
715,810	-		Psyr_0626	0.90	-1.3
715,810	-		Psyr_0626	0.90	-0.5
715,852	+				+2.0
715,852	+				+1.1
715,853	-				-0.6
715,853	-				+0.3
715,939	+				+1.6
715,941	+				+1.2
715,941	+				-2.6
715,941	+				-0.3
715,941	+				+0.3
715,941	+				+0.2
715,941	+				-1.8
715,941	+				-0.0
715,941	+				-1.7
715,941	+				-0.9
715,941	+				-1.2
715,941	+				-3.4
715,941	+				+0.7
715,941	+				+0.5
715,941	+				+1.4
715,941	+				+1.0
715,942	-				+1.9
715,942	-				+0.1
715,942	-				+0.8
715,942	-				+0.3
715,942	-				+0.7
715,942	-				-1.2
715,942	-				+0.1
715,942	-				-0.2
715,942	-				-0.5
715,942	-				+1.3
715,942	-				+1.7
715,942	-				-2.7
715,942	-				-0.2
715,974	-				-0.3
716,003	+				+3.6
716,003	+				+0.7
716,004	-				-0.5
716,004	-				+1.7
716,035	+				+0.3
716,035	+				-1.5
716,036	-				+0.4
716,036	-				+1.3
716,049	+				-0.5
716,102	+				-0.7
716,102	+				+1.0
716,103	-				+1.4