Experiment: Octanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS19900 and ABZR87_RS19905 are separated by 9 nucleotides ABZR87_RS19905 and ABZR87_RS19910 are separated by 9 nucleotides
ABZR87_RS19900: ABZR87_RS19900 - ABC transporter permease, at 841,707 to 842,858
_RS19900
ABZR87_RS19905: ABZR87_RS19905 - hypothetical protein, at 842,868 to 843,380
_RS19905
ABZR87_RS19910: ABZR87_RS19910 - bifunctional enoyl-CoA hydratase/phosphate acetyltransferase, at 843,390 to 844,835
_RS19910
Position (kb) 842
843
844 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 841.944 kb on + strand, within ABZR87_RS19900 at 841.944 kb on + strand, within ABZR87_RS19900 at 841.945 kb on - strand, within ABZR87_RS19900 at 842.093 kb on + strand, within ABZR87_RS19900 at 842.109 kb on - strand, within ABZR87_RS19900 at 842.109 kb on - strand, within ABZR87_RS19900 at 842.136 kb on + strand, within ABZR87_RS19900 at 842.137 kb on - strand, within ABZR87_RS19900 at 842.137 kb on - strand, within ABZR87_RS19900 at 842.285 kb on + strand, within ABZR87_RS19900 at 842.285 kb on + strand, within ABZR87_RS19900 at 842.285 kb on + strand, within ABZR87_RS19900 at 842.286 kb on - strand, within ABZR87_RS19900 at 842.286 kb on - strand, within ABZR87_RS19900 at 842.286 kb on - strand, within ABZR87_RS19900 at 842.540 kb on + strand, within ABZR87_RS19900 at 842.540 kb on + strand, within ABZR87_RS19900 at 842.739 kb on + strand, within ABZR87_RS19900 at 842.856 kb on + strand at 842.856 kb on + strand at 842.857 kb on - strand at 842.873 kb on + strand at 842.873 kb on + strand at 842.874 kb on - strand at 842.874 kb on - strand at 842.967 kb on + strand, within ABZR87_RS19905 at 842.968 kb on - strand, within ABZR87_RS19905 at 843.108 kb on + strand, within ABZR87_RS19905 at 843.169 kb on - strand, within ABZR87_RS19905 at 843.169 kb on - strand, within ABZR87_RS19905 at 843.524 kb on + strand at 843.525 kb on - strand at 843.525 kb on - strand at 843.687 kb on + strand, within ABZR87_RS19910 at 843.687 kb on + strand, within ABZR87_RS19910 at 843.687 kb on + strand, within ABZR87_RS19910 at 843.687 kb on + strand, within ABZR87_RS19910 at 843.687 kb on + strand, within ABZR87_RS19910 at 843.687 kb on + strand, within ABZR87_RS19910 at 843.687 kb on + strand, within ABZR87_RS19910 at 843.687 kb on + strand, within ABZR87_RS19910 at 843.688 kb on - strand, within ABZR87_RS19910 at 843.688 kb on - strand, within ABZR87_RS19910 at 843.688 kb on - strand, within ABZR87_RS19910 at 843.806 kb on + strand, within ABZR87_RS19910 at 843.806 kb on + strand, within ABZR87_RS19910 at 843.807 kb on - strand, within ABZR87_RS19910 at 843.957 kb on - strand, within ABZR87_RS19910 at 844.217 kb on + strand, within ABZR87_RS19910 at 844.218 kb on - strand, within ABZR87_RS19910 at 844.266 kb on - strand, within ABZR87_RS19910
Per-strain Table
Position Strand Gene LocusTag Fraction Octanoic (C) remove 841,944 + ABZR87_RS19900 0.21 +1.2 841,944 + ABZR87_RS19900 0.21 +0.4 841,945 - ABZR87_RS19900 0.21 -0.6 842,093 + ABZR87_RS19900 0.34 +2.0 842,109 - ABZR87_RS19900 0.35 +0.9 842,109 - ABZR87_RS19900 0.35 +0.3 842,136 + ABZR87_RS19900 0.37 +2.1 842,137 - ABZR87_RS19900 0.37 -1.0 842,137 - ABZR87_RS19900 0.37 -1.6 842,285 + ABZR87_RS19900 0.50 +1.9 842,285 + ABZR87_RS19900 0.50 +1.0 842,285 + ABZR87_RS19900 0.50 +0.4 842,286 - ABZR87_RS19900 0.50 -1.4 842,286 - ABZR87_RS19900 0.50 +0.3 842,286 - ABZR87_RS19900 0.50 +1.3 842,540 + ABZR87_RS19900 0.72 +2.0 842,540 + ABZR87_RS19900 0.72 -0.5 842,739 + ABZR87_RS19900 0.90 +0.6 842,856 + +1.1 842,856 + +1.6 842,857 - -1.6 842,873 + +2.0 842,873 + -1.1 842,874 - -0.7 842,874 - +0.0 842,967 + ABZR87_RS19905 0.19 +1.4 842,968 - ABZR87_RS19905 0.19 -0.4 843,108 + ABZR87_RS19905 0.47 -2.1 843,169 - ABZR87_RS19905 0.59 -0.4 843,169 - ABZR87_RS19905 0.59 -1.1 843,524 + +2.2 843,525 - +1.2 843,525 - -2.6 843,687 + ABZR87_RS19910 0.21 +1.0 843,687 + ABZR87_RS19910 0.21 +0.3 843,687 + ABZR87_RS19910 0.21 -1.2 843,687 + ABZR87_RS19910 0.21 +3.6 843,687 + ABZR87_RS19910 0.21 +0.4 843,687 + ABZR87_RS19910 0.21 +0.4 843,687 + ABZR87_RS19910 0.21 +0.5 843,687 + ABZR87_RS19910 0.21 +2.4 843,688 - ABZR87_RS19910 0.21 +2.1 843,688 - ABZR87_RS19910 0.21 -3.0 843,688 - ABZR87_RS19910 0.21 +1.4 843,806 + ABZR87_RS19910 0.29 +1.2 843,806 + ABZR87_RS19910 0.29 -0.0 843,807 - ABZR87_RS19910 0.29 -1.6 843,957 - ABZR87_RS19910 0.39 +2.1 844,217 + ABZR87_RS19910 0.57 +1.6 844,218 - ABZR87_RS19910 0.57 +1.0 844,266 - ABZR87_RS19910 0.61 +1.0
Or see this region's nucleotide sequence