Experiment: Octanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS19020 and ABZR87_RS19025 overlap by 4 nucleotides ABZR87_RS19025 and ABZR87_RS19030 are separated by 57 nucleotides
ABZR87_RS19020: ABZR87_RS19020 - multidrug efflux RND transporter permease subunit, at 625,030 to 628,131
_RS19020
ABZR87_RS19025: ABZR87_RS19025 - MdtB/MuxB family multidrug efflux RND transporter permease subunit, at 628,128 to 631,262
_RS19025
ABZR87_RS19030: ABZR87_RS19030 - MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit, at 631,320 to 632,717
_RS19030
Position (kb) 628
629
630
631
632 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 627.279 kb on + strand, within ABZR87_RS19020 at 627.410 kb on + strand, within ABZR87_RS19020 at 627.410 kb on + strand, within ABZR87_RS19020 at 627.410 kb on + strand, within ABZR87_RS19020 at 627.443 kb on + strand, within ABZR87_RS19020 at 627.443 kb on + strand, within ABZR87_RS19020 at 627.444 kb on - strand, within ABZR87_RS19020 at 627.444 kb on - strand, within ABZR87_RS19020 at 627.444 kb on - strand, within ABZR87_RS19020 at 627.543 kb on - strand, within ABZR87_RS19020 at 627.543 kb on - strand, within ABZR87_RS19020 at 627.668 kb on + strand, within ABZR87_RS19020 at 627.668 kb on + strand, within ABZR87_RS19020 at 627.669 kb on - strand, within ABZR87_RS19020 at 627.669 kb on - strand, within ABZR87_RS19020 at 627.669 kb on - strand, within ABZR87_RS19020 at 627.669 kb on - strand, within ABZR87_RS19020 at 627.669 kb on - strand, within ABZR87_RS19020 at 627.759 kb on + strand, within ABZR87_RS19020 at 627.759 kb on + strand, within ABZR87_RS19020 at 627.759 kb on + strand, within ABZR87_RS19020 at 628.234 kb on + strand at 628.234 kb on + strand at 628.235 kb on - strand at 628.235 kb on - strand at 628.417 kb on + strand at 628.417 kb on + strand at 628.418 kb on - strand at 628.418 kb on - strand at 628.418 kb on - strand at 628.418 kb on - strand at 628.657 kb on + strand, within ABZR87_RS19025 at 628.657 kb on + strand, within ABZR87_RS19025 at 628.657 kb on + strand, within ABZR87_RS19025 at 628.657 kb on + strand, within ABZR87_RS19025 at 628.657 kb on + strand, within ABZR87_RS19025 at 628.657 kb on + strand, within ABZR87_RS19025 at 628.657 kb on + strand, within ABZR87_RS19025 at 628.657 kb on + strand, within ABZR87_RS19025 at 628.657 kb on + strand, within ABZR87_RS19025 at 628.657 kb on + strand, within ABZR87_RS19025 at 628.658 kb on - strand, within ABZR87_RS19025 at 628.658 kb on - strand, within ABZR87_RS19025 at 628.658 kb on - strand, within ABZR87_RS19025 at 628.658 kb on - strand, within ABZR87_RS19025 at 628.658 kb on - strand, within ABZR87_RS19025 at 628.658 kb on - strand, within ABZR87_RS19025 at 628.658 kb on - strand, within ABZR87_RS19025 at 629.056 kb on + strand, within ABZR87_RS19025 at 629.057 kb on - strand, within ABZR87_RS19025 at 629.066 kb on - strand, within ABZR87_RS19025 at 629.101 kb on + strand, within ABZR87_RS19025 at 629.134 kb on + strand, within ABZR87_RS19025 at 629.135 kb on - strand, within ABZR87_RS19025 at 629.266 kb on + strand, within ABZR87_RS19025 at 629.320 kb on + strand, within ABZR87_RS19025 at 629.320 kb on + strand, within ABZR87_RS19025 at 629.320 kb on + strand, within ABZR87_RS19025 at 629.320 kb on + strand, within ABZR87_RS19025 at 629.321 kb on - strand, within ABZR87_RS19025 at 629.321 kb on - strand, within ABZR87_RS19025 at 629.321 kb on - strand, within ABZR87_RS19025 at 629.321 kb on - strand, within ABZR87_RS19025 at 629.629 kb on + strand, within ABZR87_RS19025 at 629.629 kb on + strand, within ABZR87_RS19025 at 629.629 kb on + strand, within ABZR87_RS19025 at 629.629 kb on + strand, within ABZR87_RS19025 at 629.629 kb on + strand, within ABZR87_RS19025 at 629.629 kb on + strand, within ABZR87_RS19025 at 629.758 kb on + strand, within ABZR87_RS19025 at 629.758 kb on + strand, within ABZR87_RS19025 at 629.758 kb on + strand, within ABZR87_RS19025 at 629.759 kb on - strand, within ABZR87_RS19025 at 629.759 kb on - strand, within ABZR87_RS19025 at 629.759 kb on - strand, within ABZR87_RS19025 at 629.759 kb on - strand, within ABZR87_RS19025 at 630.025 kb on + strand, within ABZR87_RS19025 at 630.026 kb on - strand, within ABZR87_RS19025 at 630.026 kb on - strand, within ABZR87_RS19025 at 630.130 kb on + strand, within ABZR87_RS19025 at 630.130 kb on + strand, within ABZR87_RS19025 at 630.130 kb on + strand, within ABZR87_RS19025 at 630.130 kb on + strand, within ABZR87_RS19025 at 630.131 kb on - strand, within ABZR87_RS19025 at 630.520 kb on + strand, within ABZR87_RS19025 at 630.520 kb on + strand, within ABZR87_RS19025 at 630.692 kb on + strand, within ABZR87_RS19025 at 630.692 kb on + strand, within ABZR87_RS19025 at 630.693 kb on - strand, within ABZR87_RS19025 at 630.877 kb on + strand, within ABZR87_RS19025 at 630.877 kb on + strand, within ABZR87_RS19025 at 630.878 kb on - strand, within ABZR87_RS19025 at 630.878 kb on - strand, within ABZR87_RS19025 at 631.112 kb on - strand at 631.113 kb on + strand at 631.114 kb on - strand at 631.114 kb on - strand at 631.321 kb on + strand at 631.322 kb on - strand at 631.600 kb on + strand, within ABZR87_RS19030 at 631.600 kb on + strand, within ABZR87_RS19030 at 631.601 kb on - strand, within ABZR87_RS19030 at 631.667 kb on + strand, within ABZR87_RS19030 at 631.903 kb on + strand, within ABZR87_RS19030 at 631.903 kb on + strand, within ABZR87_RS19030 at 631.903 kb on + strand, within ABZR87_RS19030 at 631.904 kb on - strand, within ABZR87_RS19030 at 631.904 kb on - strand, within ABZR87_RS19030 at 631.904 kb on - strand, within ABZR87_RS19030 at 631.904 kb on - strand, within ABZR87_RS19030 at 631.935 kb on - strand, within ABZR87_RS19030 at 631.935 kb on - strand, within ABZR87_RS19030 at 632.032 kb on + strand, within ABZR87_RS19030 at 632.033 kb on - strand, within ABZR87_RS19030 at 632.248 kb on + strand, within ABZR87_RS19030 at 632.248 kb on + strand, within ABZR87_RS19030 at 632.248 kb on + strand, within ABZR87_RS19030 at 632.248 kb on + strand, within ABZR87_RS19030 at 632.249 kb on - strand, within ABZR87_RS19030 at 632.249 kb on - strand, within ABZR87_RS19030 at 632.249 kb on - strand, within ABZR87_RS19030 at 632.249 kb on - strand, within ABZR87_RS19030
Per-strain Table
Position Strand Gene LocusTag Fraction Octanoic (C) remove 627,279 + ABZR87_RS19020 0.73 +2.6 627,410 + ABZR87_RS19020 0.77 +3.1 627,410 + ABZR87_RS19020 0.77 +4.5 627,410 + ABZR87_RS19020 0.77 +3.4 627,443 + ABZR87_RS19020 0.78 -1.1 627,443 + ABZR87_RS19020 0.78 +1.7 627,444 - ABZR87_RS19020 0.78 +4.3 627,444 - ABZR87_RS19020 0.78 +2.2 627,444 - ABZR87_RS19020 0.78 +2.0 627,543 - ABZR87_RS19020 0.81 +3.7 627,543 - ABZR87_RS19020 0.81 +3.6 627,668 + ABZR87_RS19020 0.85 +1.8 627,668 + ABZR87_RS19020 0.85 -1.5 627,669 - ABZR87_RS19020 0.85 +0.8 627,669 - ABZR87_RS19020 0.85 -0.3 627,669 - ABZR87_RS19020 0.85 +3.2 627,669 - ABZR87_RS19020 0.85 -2.3 627,669 - ABZR87_RS19020 0.85 -0.3 627,759 + ABZR87_RS19020 0.88 +2.4 627,759 + ABZR87_RS19020 0.88 +3.1 627,759 + ABZR87_RS19020 0.88 +2.2 628,234 + +3.4 628,234 + +3.9 628,235 - +2.5 628,235 - +2.0 628,417 + +2.9 628,417 + +3.9 628,418 - -2.0 628,418 - +2.0 628,418 - +1.7 628,418 - +3.0 628,657 + ABZR87_RS19025 0.17 +5.2 628,657 + ABZR87_RS19025 0.17 +3.3 628,657 + ABZR87_RS19025 0.17 +3.6 628,657 + ABZR87_RS19025 0.17 +2.2 628,657 + ABZR87_RS19025 0.17 -0.9 628,657 + ABZR87_RS19025 0.17 +2.4 628,657 + ABZR87_RS19025 0.17 +2.6 628,657 + ABZR87_RS19025 0.17 +1.9 628,657 + ABZR87_RS19025 0.17 +1.9 628,657 + ABZR87_RS19025 0.17 +1.1 628,658 - ABZR87_RS19025 0.17 +4.5 628,658 - ABZR87_RS19025 0.17 +3.2 628,658 - ABZR87_RS19025 0.17 +0.5 628,658 - ABZR87_RS19025 0.17 +3.7 628,658 - ABZR87_RS19025 0.17 +4.6 628,658 - ABZR87_RS19025 0.17 +2.2 628,658 - ABZR87_RS19025 0.17 -0.3 629,056 + ABZR87_RS19025 0.30 -2.5 629,057 - ABZR87_RS19025 0.30 +1.1 629,066 - ABZR87_RS19025 0.30 -0.9 629,101 + ABZR87_RS19025 0.31 +2.3 629,134 + ABZR87_RS19025 0.32 +4.9 629,135 - ABZR87_RS19025 0.32 +3.2 629,266 + ABZR87_RS19025 0.36 -2.8 629,320 + ABZR87_RS19025 0.38 +1.5 629,320 + ABZR87_RS19025 0.38 +3.4 629,320 + ABZR87_RS19025 0.38 +3.8 629,320 + ABZR87_RS19025 0.38 +2.0 629,321 - ABZR87_RS19025 0.38 -0.3 629,321 - ABZR87_RS19025 0.38 -2.6 629,321 - ABZR87_RS19025 0.38 +1.9 629,321 - ABZR87_RS19025 0.38 -2.9 629,629 + ABZR87_RS19025 0.48 +1.7 629,629 + ABZR87_RS19025 0.48 +2.8 629,629 + ABZR87_RS19025 0.48 +3.0 629,629 + ABZR87_RS19025 0.48 +0.5 629,629 + ABZR87_RS19025 0.48 +3.8 629,629 + ABZR87_RS19025 0.48 +2.4 629,758 + ABZR87_RS19025 0.52 -1.2 629,758 + ABZR87_RS19025 0.52 +4.6 629,758 + ABZR87_RS19025 0.52 -1.7 629,759 - ABZR87_RS19025 0.52 +1.7 629,759 - ABZR87_RS19025 0.52 +1.8 629,759 - ABZR87_RS19025 0.52 +3.5 629,759 - ABZR87_RS19025 0.52 -1.0 630,025 + ABZR87_RS19025 0.61 +3.2 630,026 - ABZR87_RS19025 0.61 +1.2 630,026 - ABZR87_RS19025 0.61 +1.9 630,130 + ABZR87_RS19025 0.64 +2.1 630,130 + ABZR87_RS19025 0.64 +2.0 630,130 + ABZR87_RS19025 0.64 +0.6 630,130 + ABZR87_RS19025 0.64 +3.2 630,131 - ABZR87_RS19025 0.64 +2.7 630,520 + ABZR87_RS19025 0.76 +1.7 630,520 + ABZR87_RS19025 0.76 -0.6 630,692 + ABZR87_RS19025 0.82 +1.8 630,692 + ABZR87_RS19025 0.82 +4.2 630,693 - ABZR87_RS19025 0.82 +3.3 630,877 + ABZR87_RS19025 0.88 +3.8 630,877 + ABZR87_RS19025 0.88 -0.1 630,878 - ABZR87_RS19025 0.88 +3.6 630,878 - ABZR87_RS19025 0.88 -1.6 631,112 - +2.2 631,113 + +3.3 631,114 - +2.2 631,114 - +0.1 631,321 + +4.3 631,322 - -1.2 631,600 + ABZR87_RS19030 0.20 +4.0 631,600 + ABZR87_RS19030 0.20 -1.5 631,601 - ABZR87_RS19030 0.20 +4.3 631,667 + ABZR87_RS19030 0.25 +3.6 631,903 + ABZR87_RS19030 0.42 +5.3 631,903 + ABZR87_RS19030 0.42 +0.2 631,903 + ABZR87_RS19030 0.42 +3.4 631,904 - ABZR87_RS19030 0.42 +2.1 631,904 - ABZR87_RS19030 0.42 +0.7 631,904 - ABZR87_RS19030 0.42 +4.1 631,904 - ABZR87_RS19030 0.42 +3.3 631,935 - ABZR87_RS19030 0.44 +3.6 631,935 - ABZR87_RS19030 0.44 +3.3 632,032 + ABZR87_RS19030 0.51 +0.3 632,033 - ABZR87_RS19030 0.51 +3.9 632,248 + ABZR87_RS19030 0.66 +3.4 632,248 + ABZR87_RS19030 0.66 +1.6 632,248 + ABZR87_RS19030 0.66 +3.2 632,248 + ABZR87_RS19030 0.66 +2.4 632,249 - ABZR87_RS19030 0.66 +1.6 632,249 - ABZR87_RS19030 0.66 +2.0 632,249 - ABZR87_RS19030 0.66 +1.7 632,249 - ABZR87_RS19030 0.66 +2.3
Or see this region's nucleotide sequence