Experiment: Octanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS17225 and ABZR87_RS17230 are separated by 31 nucleotides ABZR87_RS17230 and ABZR87_RS17235 are separated by 403 nucleotides
ABZR87_RS17225: ABZR87_RS17225 - maltotransferase domain-containing protein, at 219,330 to 222,929
_RS17225
ABZR87_RS17230: ABZR87_RS17230 - glycogen synthase GlgA, at 222,961 to 224,592
_RS17230
ABZR87_RS17235: ABZR87_RS17235 - alkyl hydroperoxide reductase subunit C, at 224,996 to 225,559
_RS17235
Position (kb) 222
223
224
225 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 222.026 kb on - strand, within ABZR87_RS17225 at 222.760 kb on + strand at 222.760 kb on + strand at 222.760 kb on + strand at 222.779 kb on - strand at 222.779 kb on - strand at 222.900 kb on - strand at 223.053 kb on + strand at 223.053 kb on + strand at 223.054 kb on - strand at 223.054 kb on - strand at 223.160 kb on + strand, within ABZR87_RS17230 at 223.160 kb on + strand, within ABZR87_RS17230 at 223.160 kb on + strand, within ABZR87_RS17230 at 223.172 kb on + strand, within ABZR87_RS17230 at 223.173 kb on - strand, within ABZR87_RS17230 at 223.173 kb on - strand, within ABZR87_RS17230 at 223.173 kb on - strand, within ABZR87_RS17230 at 223.220 kb on + strand, within ABZR87_RS17230 at 223.220 kb on + strand, within ABZR87_RS17230 at 223.221 kb on - strand, within ABZR87_RS17230 at 223.425 kb on - strand, within ABZR87_RS17230 at 223.425 kb on - strand, within ABZR87_RS17230 at 223.502 kb on + strand, within ABZR87_RS17230 at 223.502 kb on + strand, within ABZR87_RS17230 at 223.502 kb on + strand, within ABZR87_RS17230 at 223.503 kb on - strand, within ABZR87_RS17230 at 223.514 kb on + strand, within ABZR87_RS17230 at 223.577 kb on + strand, within ABZR87_RS17230 at 223.577 kb on + strand, within ABZR87_RS17230 at 223.577 kb on + strand, within ABZR87_RS17230 at 223.577 kb on + strand, within ABZR87_RS17230 at 223.577 kb on + strand, within ABZR87_RS17230 at 223.578 kb on - strand, within ABZR87_RS17230 at 223.578 kb on - strand, within ABZR87_RS17230 at 223.578 kb on - strand, within ABZR87_RS17230 at 223.934 kb on + strand, within ABZR87_RS17230 at 223.935 kb on - strand, within ABZR87_RS17230 at 223.935 kb on - strand, within ABZR87_RS17230 at 223.935 kb on - strand, within ABZR87_RS17230 at 223.935 kb on - strand, within ABZR87_RS17230 at 223.935 kb on - strand, within ABZR87_RS17230 at 224.089 kb on - strand, within ABZR87_RS17230 at 224.089 kb on - strand, within ABZR87_RS17230 at 224.097 kb on + strand, within ABZR87_RS17230 at 224.098 kb on - strand, within ABZR87_RS17230 at 224.098 kb on - strand, within ABZR87_RS17230 at 224.264 kb on + strand, within ABZR87_RS17230 at 224.289 kb on - strand, within ABZR87_RS17230 at 224.517 kb on + strand at 224.517 kb on + strand at 224.518 kb on - strand at 224.518 kb on - strand at 224.518 kb on - strand at 224.518 kb on - strand at 224.696 kb on + strand at 224.696 kb on + strand at 224.696 kb on + strand at 224.697 kb on - strand at 224.697 kb on - strand at 224.697 kb on - strand at 224.697 kb on - strand at 224.697 kb on - strand at 224.776 kb on + strand at 224.815 kb on - strand at 224.815 kb on - strand at 224.824 kb on + strand at 224.824 kb on + strand at 224.916 kb on + strand at 224.950 kb on + strand at 224.950 kb on + strand at 224.995 kb on + strand at 224.995 kb on + strand at 224.995 kb on + strand at 224.995 kb on + strand at 224.995 kb on + strand at 224.995 kb on + strand at 224.995 kb on + strand at 224.995 kb on + strand at 224.995 kb on + strand at 224.996 kb on - strand at 225.010 kb on + strand at 225.010 kb on + strand at 225.010 kb on + strand at 225.011 kb on - strand at 225.011 kb on - strand at 225.011 kb on - strand at 225.167 kb on + strand, within ABZR87_RS17235 at 225.167 kb on + strand, within ABZR87_RS17235 at 225.167 kb on + strand, within ABZR87_RS17235 at 225.168 kb on - strand, within ABZR87_RS17235 at 225.168 kb on - strand, within ABZR87_RS17235 at 225.168 kb on - strand, within ABZR87_RS17235 at 225.200 kb on + strand, within ABZR87_RS17235 at 225.200 kb on + strand, within ABZR87_RS17235 at 225.200 kb on + strand, within ABZR87_RS17235 at 225.201 kb on - strand, within ABZR87_RS17235 at 225.201 kb on - strand, within ABZR87_RS17235 at 225.201 kb on - strand, within ABZR87_RS17235 at 225.557 kb on + strand at 225.557 kb on + strand at 225.558 kb on - strand at 225.558 kb on - strand at 225.558 kb on - strand at 225.558 kb on - strand at 225.558 kb on - strand at 225.565 kb on - strand at 225.565 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Octanoic (C) remove 222,026 - ABZR87_RS17225 0.75 -0.3 222,760 + +2.2 222,760 + +1.4 222,760 + -1.9 222,779 - -2.3 222,779 - +1.3 222,900 - -2.4 223,053 + +1.4 223,053 + +2.9 223,054 - -1.9 223,054 - -0.0 223,160 + ABZR87_RS17230 0.12 +0.7 223,160 + ABZR87_RS17230 0.12 +1.2 223,160 + ABZR87_RS17230 0.12 -2.8 223,172 + ABZR87_RS17230 0.13 +0.3 223,173 - ABZR87_RS17230 0.13 -0.6 223,173 - ABZR87_RS17230 0.13 +1.3 223,173 - ABZR87_RS17230 0.13 +0.7 223,220 + ABZR87_RS17230 0.16 +2.9 223,220 + ABZR87_RS17230 0.16 +1.1 223,221 - ABZR87_RS17230 0.16 -0.3 223,425 - ABZR87_RS17230 0.28 +1.1 223,425 - ABZR87_RS17230 0.28 -2.2 223,502 + ABZR87_RS17230 0.33 +4.5 223,502 + ABZR87_RS17230 0.33 +1.2 223,502 + ABZR87_RS17230 0.33 +1.7 223,503 - ABZR87_RS17230 0.33 -0.3 223,514 + ABZR87_RS17230 0.34 +1.2 223,577 + ABZR87_RS17230 0.38 +3.9 223,577 + ABZR87_RS17230 0.38 -1.4 223,577 + ABZR87_RS17230 0.38 +2.1 223,577 + ABZR87_RS17230 0.38 +2.4 223,577 + ABZR87_RS17230 0.38 -2.5 223,578 - ABZR87_RS17230 0.38 -0.6 223,578 - ABZR87_RS17230 0.38 -1.2 223,578 - ABZR87_RS17230 0.38 -1.8 223,934 + ABZR87_RS17230 0.60 +0.2 223,935 - ABZR87_RS17230 0.60 -1.8 223,935 - ABZR87_RS17230 0.60 -0.9 223,935 - ABZR87_RS17230 0.60 +0.3 223,935 - ABZR87_RS17230 0.60 +1.1 223,935 - ABZR87_RS17230 0.60 +1.3 224,089 - ABZR87_RS17230 0.69 +2.7 224,089 - ABZR87_RS17230 0.69 +2.2 224,097 + ABZR87_RS17230 0.70 +4.9 224,098 - ABZR87_RS17230 0.70 +1.7 224,098 - ABZR87_RS17230 0.70 +2.7 224,264 + ABZR87_RS17230 0.80 -2.7 224,289 - ABZR87_RS17230 0.81 -0.1 224,517 + -0.0 224,517 + +2.5 224,518 - +1.6 224,518 - -1.1 224,518 - +1.0 224,518 - -2.2 224,696 + +1.3 224,696 + +3.1 224,696 + -0.8 224,697 - -0.3 224,697 - +0.3 224,697 - -1.7 224,697 - +0.9 224,697 - +1.8 224,776 + +2.5 224,815 - -1.4 224,815 - -1.9 224,824 + +1.3 224,824 + -3.5 224,916 + +1.6 224,950 + +0.7 224,950 + +1.6 224,995 + +1.0 224,995 + -2.2 224,995 + -0.4 224,995 + +0.3 224,995 + +0.7 224,995 + -0.9 224,995 + +3.0 224,995 + -0.9 224,995 + +2.7 224,996 - -0.1 225,010 + +1.6 225,010 + -0.7 225,010 + -0.1 225,011 - +1.0 225,011 - +2.4 225,011 - +0.4 225,167 + ABZR87_RS17235 0.30 +0.7 225,167 + ABZR87_RS17235 0.30 +1.3 225,167 + ABZR87_RS17235 0.30 +1.2 225,168 - ABZR87_RS17235 0.30 +4.0 225,168 - ABZR87_RS17235 0.30 -2.8 225,168 - ABZR87_RS17235 0.30 +0.1 225,200 + ABZR87_RS17235 0.36 +0.1 225,200 + ABZR87_RS17235 0.36 -3.5 225,200 + ABZR87_RS17235 0.36 +0.5 225,201 - ABZR87_RS17235 0.36 -0.5 225,201 - ABZR87_RS17235 0.36 +0.5 225,201 - ABZR87_RS17235 0.36 +1.6 225,557 + -2.6 225,557 + -0.9 225,558 - +1.5 225,558 - +1.2 225,558 - -1.9 225,558 - -2.7 225,558 - +0.1 225,565 - +1.9 225,565 - -1.2
Or see this region's nucleotide sequence