Experiment: Octanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16770 and ABZR87_RS16775 are separated by 65 nucleotides ABZR87_RS16775 and ABZR87_RS16780 are separated by 885 nucleotides
ABZR87_RS16770: ABZR87_RS16770 - HD domain-containing phosphohydrolase, at 113,367 to 116,309
_RS16770
ABZR87_RS16775: ABZR87_RS16775 - chloride channel protein, at 116,375 to 117,685
_RS16775
ABZR87_RS16780: ABZR87_RS16780 - YadA-like family protein, at 118,571 to 123,865
_RS16780
Position (kb)
116
117
118 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 115.420 kb on + strand, within ABZR87_RS16770 at 115.614 kb on - strand, within ABZR87_RS16770 at 115.799 kb on + strand, within ABZR87_RS16770 at 115.799 kb on + strand, within ABZR87_RS16770 at 115.800 kb on - strand, within ABZR87_RS16770 at 115.800 kb on - strand, within ABZR87_RS16770 at 115.815 kb on + strand, within ABZR87_RS16770 at 115.815 kb on + strand, within ABZR87_RS16770 at 115.816 kb on - strand, within ABZR87_RS16770 at 115.816 kb on - strand, within ABZR87_RS16770 at 116.096 kb on + strand at 116.097 kb on + strand at 116.097 kb on + strand at 116.097 kb on + strand at 116.098 kb on - strand at 116.098 kb on - strand at 116.098 kb on - strand at 116.162 kb on + strand at 116.163 kb on - strand at 116.205 kb on + strand at 116.205 kb on + strand at 116.205 kb on + strand at 116.206 kb on - strand at 116.206 kb on - strand at 116.206 kb on - strand at 116.206 kb on - strand at 116.206 kb on - strand at 116.206 kb on - strand at 116.206 kb on - strand at 116.268 kb on + strand at 116.268 kb on + strand at 116.269 kb on - strand at 116.269 kb on - strand at 116.323 kb on + strand at 116.337 kb on + strand at 116.337 kb on + strand at 116.337 kb on + strand at 116.337 kb on + strand at 116.338 kb on - strand at 116.338 kb on - strand at 116.338 kb on - strand at 116.338 kb on - strand at 116.339 kb on + strand at 116.340 kb on - strand at 116.438 kb on + strand at 116.438 kb on + strand at 116.438 kb on + strand at 116.438 kb on + strand at 116.439 kb on - strand at 116.489 kb on + strand at 116.489 kb on + strand at 116.489 kb on + strand at 116.490 kb on - strand at 116.505 kb on - strand at 116.798 kb on + strand, within ABZR87_RS16775 at 116.798 kb on + strand, within ABZR87_RS16775 at 116.798 kb on + strand, within ABZR87_RS16775 at 116.798 kb on + strand, within ABZR87_RS16775 at 116.798 kb on + strand, within ABZR87_RS16775 at 116.798 kb on + strand, within ABZR87_RS16775 at 116.799 kb on - strand, within ABZR87_RS16775 at 116.799 kb on - strand, within ABZR87_RS16775 at 116.799 kb on - strand, within ABZR87_RS16775 at 116.799 kb on - strand, within ABZR87_RS16775 at 116.799 kb on - strand, within ABZR87_RS16775 at 116.799 kb on - strand, within ABZR87_RS16775 at 116.799 kb on - strand, within ABZR87_RS16775 at 116.799 kb on - strand, within ABZR87_RS16775 at 116.799 kb on - strand, within ABZR87_RS16775 at 116.799 kb on - strand, within ABZR87_RS16775 at 116.893 kb on + strand, within ABZR87_RS16775 at 116.893 kb on + strand, within ABZR87_RS16775 at 116.893 kb on + strand, within ABZR87_RS16775 at 116.980 kb on + strand, within ABZR87_RS16775 at 116.980 kb on + strand, within ABZR87_RS16775 at 116.980 kb on + strand, within ABZR87_RS16775 at 116.980 kb on + strand, within ABZR87_RS16775 at 116.981 kb on - strand, within ABZR87_RS16775 at 117.020 kb on + strand, within ABZR87_RS16775 at 117.020 kb on + strand, within ABZR87_RS16775 at 117.020 kb on + strand, within ABZR87_RS16775 at 117.020 kb on + strand, within ABZR87_RS16775 at 117.020 kb on + strand, within ABZR87_RS16775 at 117.020 kb on + strand, within ABZR87_RS16775 at 117.020 kb on + strand, within ABZR87_RS16775 at 117.020 kb on + strand, within ABZR87_RS16775 at 117.021 kb on - strand, within ABZR87_RS16775 at 117.021 kb on - strand, within ABZR87_RS16775 at 117.021 kb on - strand, within ABZR87_RS16775 at 117.021 kb on - strand, within ABZR87_RS16775 at 117.021 kb on - strand, within ABZR87_RS16775 at 117.021 kb on - strand, within ABZR87_RS16775 at 117.026 kb on + strand, within ABZR87_RS16775 at 117.026 kb on + strand, within ABZR87_RS16775 at 117.026 kb on + strand, within ABZR87_RS16775 at 117.027 kb on - strand, within ABZR87_RS16775 at 117.027 kb on - strand, within ABZR87_RS16775 at 117.144 kb on + strand, within ABZR87_RS16775 at 117.144 kb on + strand, within ABZR87_RS16775 at 117.145 kb on - strand, within ABZR87_RS16775 at 117.145 kb on - strand, within ABZR87_RS16775 at 117.145 kb on - strand, within ABZR87_RS16775 at 117.145 kb on - strand, within ABZR87_RS16775 at 117.323 kb on + strand, within ABZR87_RS16775 at 117.323 kb on + strand, within ABZR87_RS16775 at 117.323 kb on + strand, within ABZR87_RS16775 at 117.323 kb on + strand, within ABZR87_RS16775 at 117.323 kb on + strand, within ABZR87_RS16775 at 117.323 kb on + strand, within ABZR87_RS16775 at 117.324 kb on - strand, within ABZR87_RS16775 at 117.324 kb on - strand, within ABZR87_RS16775 at 117.324 kb on - strand, within ABZR87_RS16775 at 117.324 kb on - strand, within ABZR87_RS16775 at 117.324 kb on - strand, within ABZR87_RS16775 at 117.359 kb on + strand, within ABZR87_RS16775 at 117.359 kb on + strand, within ABZR87_RS16775 at 117.359 kb on + strand, within ABZR87_RS16775 at 117.360 kb on - strand, within ABZR87_RS16775 at 117.360 kb on - strand, within ABZR87_RS16775 at 117.360 kb on - strand, within ABZR87_RS16775 at 117.360 kb on - strand, within ABZR87_RS16775 at 117.399 kb on + strand, within ABZR87_RS16775 at 117.488 kb on + strand, within ABZR87_RS16775 at 117.489 kb on - strand, within ABZR87_RS16775 at 117.489 kb on - strand, within ABZR87_RS16775 at 117.489 kb on - strand, within ABZR87_RS16775 at 117.521 kb on + strand, within ABZR87_RS16775 at 117.629 kb on + strand at 117.629 kb on + strand at 117.630 kb on - strand at 117.630 kb on - strand at 117.779 kb on - strand at 117.841 kb on + strand at 117.841 kb on + strand at 117.842 kb on - strand at 117.842 kb on - strand at 117.844 kb on + strand at 117.845 kb on - strand at 117.845 kb on - strand at 117.868 kb on - strand at 117.955 kb on + strand at 117.955 kb on + strand at 117.955 kb on + strand at 117.955 kb on + strand at 117.956 kb on - strand at 117.956 kb on - strand at 117.956 kb on - strand at 117.975 kb on - strand at 117.998 kb on + strand at 118.047 kb on - strand at 118.047 kb on - strand at 118.122 kb on + strand at 118.137 kb on + strand at 118.137 kb on + strand at 118.137 kb on + strand at 118.137 kb on + strand at 118.138 kb on - strand at 118.146 kb on + strand at 118.147 kb on - strand at 118.147 kb on - strand at 118.151 kb on + strand at 118.151 kb on + strand at 118.151 kb on + strand at 118.151 kb on + strand at 118.151 kb on + strand at 118.152 kb on - strand at 118.152 kb on - strand at 118.155 kb on + strand at 118.155 kb on + strand at 118.155 kb on + strand at 118.155 kb on + strand at 118.155 kb on + strand at 118.155 kb on + strand at 118.155 kb on + strand at 118.155 kb on + strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.156 kb on - strand at 118.161 kb on + strand at 118.161 kb on + strand at 118.161 kb on + strand at 118.161 kb on + strand at 118.162 kb on - strand at 118.162 kb on - strand at 118.162 kb on - strand at 118.162 kb on - strand at 118.171 kb on + strand at 118.171 kb on + strand at 118.171 kb on + strand at 118.171 kb on + strand at 118.171 kb on + strand at 118.171 kb on + strand at 118.171 kb on + strand at 118.172 kb on - strand at 118.172 kb on - strand at 118.200 kb on + strand at 118.200 kb on + strand at 118.200 kb on + strand at 118.200 kb on + strand at 118.200 kb on + strand at 118.201 kb on - strand at 118.201 kb on - strand at 118.201 kb on - strand at 118.201 kb on - strand at 118.201 kb on - strand at 118.201 kb on - strand at 118.357 kb on + strand at 118.358 kb on - strand at 118.358 kb on - strand at 118.583 kb on + strand at 118.661 kb on - strand at 118.661 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Octanoic (C) remove 115,420 + ABZR87_RS16770 0.70 +0.2 115,614 - ABZR87_RS16770 0.76 +1.3 115,799 + ABZR87_RS16770 0.83 -0.7 115,799 + ABZR87_RS16770 0.83 -1.3 115,800 - ABZR87_RS16770 0.83 +2.1 115,800 - ABZR87_RS16770 0.83 +1.9 115,815 + ABZR87_RS16770 0.83 -0.1 115,815 + ABZR87_RS16770 0.83 -1.9 115,816 - ABZR87_RS16770 0.83 +1.7 115,816 - ABZR87_RS16770 0.83 +4.0 116,096 + -0.5 116,097 + +0.3 116,097 + +0.1 116,097 + -0.1 116,098 - -2.4 116,098 - +1.6 116,098 - -1.3 116,162 + +4.9 116,163 - +1.3 116,205 + -1.8 116,205 + +0.7 116,205 + +0.3 116,206 - +1.7 116,206 - +1.2 116,206 - +1.6 116,206 - -3.3 116,206 - -2.6 116,206 - +0.8 116,206 - +0.1 116,268 + +0.3 116,268 + -2.6 116,269 - -0.6 116,269 - -2.1 116,323 + +1.0 116,337 + -0.7 116,337 + -1.9 116,337 + -2.1 116,337 + -0.7 116,338 - -0.9 116,338 - +2.1 116,338 - -3.1 116,338 - -2.5 116,339 + -0.0 116,340 - -0.5 116,438 + +0.7 116,438 + -2.5 116,438 + +1.4 116,438 + +1.2 116,439 - -0.3 116,489 + -0.1 116,489 + +2.6 116,489 + -0.3 116,490 - -1.7 116,505 - -1.7 116,798 + ABZR87_RS16775 0.32 -2.3 116,798 + ABZR87_RS16775 0.32 -0.2 116,798 + ABZR87_RS16775 0.32 +2.1 116,798 + ABZR87_RS16775 0.32 +0.1 116,798 + ABZR87_RS16775 0.32 +1.4 116,798 + ABZR87_RS16775 0.32 +0.3 116,799 - ABZR87_RS16775 0.32 +0.2 116,799 - ABZR87_RS16775 0.32 -1.0 116,799 - ABZR87_RS16775 0.32 -0.9 116,799 - ABZR87_RS16775 0.32 -2.8 116,799 - ABZR87_RS16775 0.32 +2.0 116,799 - ABZR87_RS16775 0.32 +1.0 116,799 - ABZR87_RS16775 0.32 -0.7 116,799 - ABZR87_RS16775 0.32 +0.8 116,799 - ABZR87_RS16775 0.32 +0.3 116,799 - ABZR87_RS16775 0.32 +2.5 116,893 + ABZR87_RS16775 0.40 -2.7 116,893 + ABZR87_RS16775 0.40 -2.9 116,893 + ABZR87_RS16775 0.40 +0.5 116,980 + ABZR87_RS16775 0.46 -1.0 116,980 + ABZR87_RS16775 0.46 -1.3 116,980 + ABZR87_RS16775 0.46 +1.1 116,980 + ABZR87_RS16775 0.46 -2.0 116,981 - ABZR87_RS16775 0.46 +0.5 117,020 + ABZR87_RS16775 0.49 +1.7 117,020 + ABZR87_RS16775 0.49 +0.5 117,020 + ABZR87_RS16775 0.49 -1.8 117,020 + ABZR87_RS16775 0.49 +0.6 117,020 + ABZR87_RS16775 0.49 +0.1 117,020 + ABZR87_RS16775 0.49 +1.1 117,020 + ABZR87_RS16775 0.49 -0.8 117,020 + ABZR87_RS16775 0.49 -0.7 117,021 - ABZR87_RS16775 0.49 +0.4 117,021 - ABZR87_RS16775 0.49 -0.7 117,021 - ABZR87_RS16775 0.49 +0.3 117,021 - ABZR87_RS16775 0.49 -0.5 117,021 - ABZR87_RS16775 0.49 -2.3 117,021 - ABZR87_RS16775 0.49 -1.0 117,026 + ABZR87_RS16775 0.50 +0.7 117,026 + ABZR87_RS16775 0.50 +1.1 117,026 + ABZR87_RS16775 0.50 -2.1 117,027 - ABZR87_RS16775 0.50 -2.7 117,027 - ABZR87_RS16775 0.50 +0.6 117,144 + ABZR87_RS16775 0.59 -0.7 117,144 + ABZR87_RS16775 0.59 -1.5 117,145 - ABZR87_RS16775 0.59 +0.2 117,145 - ABZR87_RS16775 0.59 -1.7 117,145 - ABZR87_RS16775 0.59 -2.7 117,145 - ABZR87_RS16775 0.59 -2.1 117,323 + ABZR87_RS16775 0.72 -0.3 117,323 + ABZR87_RS16775 0.72 -0.7 117,323 + ABZR87_RS16775 0.72 -0.3 117,323 + ABZR87_RS16775 0.72 -0.0 117,323 + ABZR87_RS16775 0.72 +0.9 117,323 + ABZR87_RS16775 0.72 +1.7 117,324 - ABZR87_RS16775 0.72 -0.7 117,324 - ABZR87_RS16775 0.72 -2.2 117,324 - ABZR87_RS16775 0.72 -0.4 117,324 - ABZR87_RS16775 0.72 -2.9 117,324 - ABZR87_RS16775 0.72 +0.7 117,359 + ABZR87_RS16775 0.75 +1.4 117,359 + ABZR87_RS16775 0.75 -0.1 117,359 + ABZR87_RS16775 0.75 +0.7 117,360 - ABZR87_RS16775 0.75 -0.0 117,360 - ABZR87_RS16775 0.75 +0.6 117,360 - ABZR87_RS16775 0.75 +3.6 117,360 - ABZR87_RS16775 0.75 +1.2 117,399 + ABZR87_RS16775 0.78 -2.3 117,488 + ABZR87_RS16775 0.85 +1.5 117,489 - ABZR87_RS16775 0.85 -1.3 117,489 - ABZR87_RS16775 0.85 +0.8 117,489 - ABZR87_RS16775 0.85 +0.6 117,521 + ABZR87_RS16775 0.87 -1.9 117,629 + +0.8 117,629 + -0.6 117,630 - +0.9 117,630 - +1.1 117,779 - +2.8 117,841 + -1.6 117,841 + +1.7 117,842 - +1.0 117,842 - +0.5 117,844 + +0.7 117,845 - -0.9 117,845 - -3.9 117,868 - -1.2 117,955 + +1.0 117,955 + -0.4 117,955 + -2.7 117,955 + -0.9 117,956 - +2.6 117,956 - +2.3 117,956 - +1.3 117,975 - -1.8 117,998 + +0.7 118,047 - +0.9 118,047 - -0.1 118,122 + -2.3 118,137 + +1.8 118,137 + +0.1 118,137 + -1.6 118,137 + -1.9 118,138 - -1.1 118,146 + +1.4 118,147 - +0.1 118,147 - -2.9 118,151 + +2.5 118,151 + +2.2 118,151 + +0.1 118,151 + -1.1 118,151 + +2.5 118,152 - -2.6 118,152 - -1.8 118,155 + +3.0 118,155 + +2.9 118,155 + +3.0 118,155 + +1.8 118,155 + +1.1 118,155 + +5.4 118,155 + +1.4 118,155 + +1.8 118,156 - +1.5 118,156 - +3.5 118,156 - -0.5 118,156 - +1.3 118,156 - +0.8 118,156 - +1.7 118,156 - +0.5 118,156 - -0.3 118,156 - -0.0 118,156 - +1.8 118,156 - +0.5 118,156 - +2.2 118,156 - +0.1 118,156 - -1.0 118,156 - -2.3 118,156 - -1.2 118,161 + -2.4 118,161 + +1.0 118,161 + +0.3 118,161 + -1.1 118,162 - +3.3 118,162 - +0.9 118,162 - +1.2 118,162 - +1.8 118,171 + -0.4 118,171 + -0.0 118,171 + -0.2 118,171 + +0.2 118,171 + +4.1 118,171 + +2.3 118,171 + -1.1 118,172 - +1.2 118,172 - +1.2 118,200 + +0.2 118,200 + +0.1 118,200 + +2.3 118,200 + -2.6 118,200 + -2.2 118,201 - +2.6 118,201 - -0.3 118,201 - +1.4 118,201 - +0.6 118,201 - +1.5 118,201 - +1.6 118,357 + -3.2 118,358 - -0.9 118,358 - +1.5 118,583 + +1.6 118,661 - +1.5 118,661 - -2.3
Or see this region's nucleotide sequence