Experiment: Octanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16600 and ABZR87_RS16605 overlap by 14 nucleotides ABZR87_RS16605 and ABZR87_RS16610 are separated by 779 nucleotides
ABZR87_RS16600: ABZR87_RS16600 - fatty acid desaturase, at 73,122 to 74,096
_RS16600
ABZR87_RS16605: ABZR87_RS16605 - PhnD/SsuA/transferrin family substrate-binding protein, at 74,083 to 74,910
_RS16605
ABZR87_RS16610: ABZR87_RS16610 - hypothetical protein, at 75,690 to 76,058
_RS16610
Position (kb) 74
75 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 73.084 kb on + strand at 73.085 kb on - strand at 73.085 kb on - strand at 73.131 kb on + strand at 73.131 kb on + strand at 73.131 kb on + strand at 73.131 kb on + strand at 73.132 kb on - strand at 73.228 kb on - strand, within ABZR87_RS16600 at 73.228 kb on - strand, within ABZR87_RS16600 at 73.244 kb on + strand, within ABZR87_RS16600 at 73.314 kb on + strand, within ABZR87_RS16600 at 73.314 kb on + strand, within ABZR87_RS16600 at 73.315 kb on - strand, within ABZR87_RS16600 at 73.414 kb on - strand, within ABZR87_RS16600 at 73.414 kb on - strand, within ABZR87_RS16600 at 73.488 kb on + strand, within ABZR87_RS16600 at 73.488 kb on + strand, within ABZR87_RS16600 at 73.488 kb on + strand, within ABZR87_RS16600 at 73.489 kb on - strand, within ABZR87_RS16600 at 73.489 kb on - strand, within ABZR87_RS16600 at 73.489 kb on - strand, within ABZR87_RS16600 at 73.489 kb on - strand, within ABZR87_RS16600 at 73.489 kb on - strand, within ABZR87_RS16600 at 73.513 kb on - strand, within ABZR87_RS16600 at 73.542 kb on + strand, within ABZR87_RS16600 at 73.542 kb on + strand, within ABZR87_RS16600 at 73.542 kb on + strand, within ABZR87_RS16600 at 73.543 kb on - strand, within ABZR87_RS16600 at 73.543 kb on - strand, within ABZR87_RS16600 at 73.543 kb on - strand, within ABZR87_RS16600 at 73.543 kb on - strand, within ABZR87_RS16600 at 73.557 kb on - strand, within ABZR87_RS16600 at 73.881 kb on + strand, within ABZR87_RS16600 at 73.881 kb on + strand, within ABZR87_RS16600 at 73.881 kb on + strand, within ABZR87_RS16600 at 73.881 kb on + strand, within ABZR87_RS16600 at 73.882 kb on - strand, within ABZR87_RS16600 at 73.882 kb on - strand, within ABZR87_RS16600 at 73.882 kb on - strand, within ABZR87_RS16600 at 73.882 kb on - strand, within ABZR87_RS16600 at 73.882 kb on - strand, within ABZR87_RS16600 at 73.938 kb on + strand, within ABZR87_RS16600 at 73.959 kb on + strand, within ABZR87_RS16600 at 73.960 kb on - strand, within ABZR87_RS16600 at 73.960 kb on - strand, within ABZR87_RS16600 at 74.017 kb on - strand at 74.122 kb on + strand at 74.122 kb on + strand at 74.123 kb on - strand at 74.123 kb on - strand at 74.158 kb on - strand at 74.383 kb on + strand, within ABZR87_RS16605 at 74.383 kb on + strand, within ABZR87_RS16605 at 74.384 kb on - strand, within ABZR87_RS16605 at 74.384 kb on - strand, within ABZR87_RS16605 at 74.386 kb on - strand, within ABZR87_RS16605 at 74.386 kb on - strand, within ABZR87_RS16605 at 74.386 kb on - strand, within ABZR87_RS16605 at 74.386 kb on - strand, within ABZR87_RS16605 at 74.386 kb on - strand, within ABZR87_RS16605 at 74.386 kb on - strand, within ABZR87_RS16605 at 74.386 kb on - strand, within ABZR87_RS16605 at 75.267 kb on + strand at 75.267 kb on + strand at 75.267 kb on + strand at 75.268 kb on - strand at 75.268 kb on - strand at 75.450 kb on + strand at 75.450 kb on + strand at 75.450 kb on + strand at 75.451 kb on - strand at 75.451 kb on - strand at 75.451 kb on - strand at 75.451 kb on - strand at 75.451 kb on - strand at 75.452 kb on + strand at 75.452 kb on + strand at 75.453 kb on - strand at 75.453 kb on - strand at 75.453 kb on - strand at 75.555 kb on + strand at 75.555 kb on + strand at 75.556 kb on - strand at 75.556 kb on - strand at 75.556 kb on - strand at 75.591 kb on - strand at 75.617 kb on - strand at 75.617 kb on - strand at 75.617 kb on - strand at 75.695 kb on + strand at 75.696 kb on - strand at 75.696 kb on - strand at 75.723 kb on + strand at 75.723 kb on + strand at 75.801 kb on + strand, within ABZR87_RS16610 at 75.801 kb on + strand, within ABZR87_RS16610 at 75.801 kb on + strand, within ABZR87_RS16610 at 75.801 kb on + strand, within ABZR87_RS16610 at 75.816 kb on - strand, within ABZR87_RS16610 at 75.831 kb on + strand, within ABZR87_RS16610 at 75.832 kb on - strand, within ABZR87_RS16610 at 75.832 kb on - strand, within ABZR87_RS16610
Per-strain Table
Position Strand Gene LocusTag Fraction Octanoic (C) remove 73,084 + +0.7 73,085 - +0.9 73,085 - -0.7 73,131 + -1.3 73,131 + -0.1 73,131 + -0.5 73,131 + +1.2 73,132 - +0.1 73,228 - ABZR87_RS16600 0.11 +1.2 73,228 - ABZR87_RS16600 0.11 +0.3 73,244 + ABZR87_RS16600 0.13 +0.8 73,314 + ABZR87_RS16600 0.20 +0.8 73,314 + ABZR87_RS16600 0.20 +1.1 73,315 - ABZR87_RS16600 0.20 -0.5 73,414 - ABZR87_RS16600 0.30 +1.7 73,414 - ABZR87_RS16600 0.30 -2.5 73,488 + ABZR87_RS16600 0.38 +0.1 73,488 + ABZR87_RS16600 0.38 -0.1 73,488 + ABZR87_RS16600 0.38 +0.3 73,489 - ABZR87_RS16600 0.38 -0.7 73,489 - ABZR87_RS16600 0.38 +1.4 73,489 - ABZR87_RS16600 0.38 -0.3 73,489 - ABZR87_RS16600 0.38 +0.7 73,489 - ABZR87_RS16600 0.38 -0.8 73,513 - ABZR87_RS16600 0.40 +1.1 73,542 + ABZR87_RS16600 0.43 -3.5 73,542 + ABZR87_RS16600 0.43 -2.0 73,542 + ABZR87_RS16600 0.43 -0.3 73,543 - ABZR87_RS16600 0.43 -2.0 73,543 - ABZR87_RS16600 0.43 -2.5 73,543 - ABZR87_RS16600 0.43 -1.3 73,543 - ABZR87_RS16600 0.43 -1.7 73,557 - ABZR87_RS16600 0.45 +0.3 73,881 + ABZR87_RS16600 0.78 -1.8 73,881 + ABZR87_RS16600 0.78 +0.7 73,881 + ABZR87_RS16600 0.78 -0.4 73,881 + ABZR87_RS16600 0.78 +0.7 73,882 - ABZR87_RS16600 0.78 -2.5 73,882 - ABZR87_RS16600 0.78 +1.7 73,882 - ABZR87_RS16600 0.78 +0.6 73,882 - ABZR87_RS16600 0.78 +1.2 73,882 - ABZR87_RS16600 0.78 +0.4 73,938 + ABZR87_RS16600 0.84 -1.7 73,959 + ABZR87_RS16600 0.86 -0.7 73,960 - ABZR87_RS16600 0.86 -1.0 73,960 - ABZR87_RS16600 0.86 +0.8 74,017 - -2.7 74,122 + +1.0 74,122 + +1.9 74,123 - -0.8 74,123 - -1.8 74,158 - +0.2 74,383 + ABZR87_RS16605 0.36 -0.9 74,383 + ABZR87_RS16605 0.36 -1.9 74,384 - ABZR87_RS16605 0.36 -3.0 74,384 - ABZR87_RS16605 0.36 -3.2 74,386 - ABZR87_RS16605 0.37 +3.4 74,386 - ABZR87_RS16605 0.37 -1.9 74,386 - ABZR87_RS16605 0.37 -0.4 74,386 - ABZR87_RS16605 0.37 -0.2 74,386 - ABZR87_RS16605 0.37 -0.1 74,386 - ABZR87_RS16605 0.37 +0.5 74,386 - ABZR87_RS16605 0.37 +0.1 75,267 + -3.1 75,267 + -1.5 75,267 + -1.3 75,268 - +1.2 75,268 - -2.6 75,450 + +0.5 75,450 + -0.6 75,450 + -0.5 75,451 - +2.0 75,451 - -1.1 75,451 - -0.3 75,451 - -1.8 75,451 - +1.1 75,452 + -0.3 75,452 + +0.6 75,453 - +0.8 75,453 - +0.4 75,453 - -1.5 75,555 + -2.0 75,555 + -2.0 75,556 - +0.2 75,556 - +0.1 75,556 - -0.4 75,591 - +0.2 75,617 - -1.7 75,617 - -1.9 75,617 - -1.5 75,695 + +0.9 75,696 - -1.8 75,696 - -2.1 75,723 + +0.5 75,723 + -3.4 75,801 + ABZR87_RS16610 0.30 +0.1 75,801 + ABZR87_RS16610 0.30 +0.3 75,801 + ABZR87_RS16610 0.30 +1.0 75,801 + ABZR87_RS16610 0.30 +1.3 75,816 - ABZR87_RS16610 0.34 -0.1 75,831 + ABZR87_RS16610 0.38 +1.7 75,832 - ABZR87_RS16610 0.38 -1.3 75,832 - ABZR87_RS16610 0.38 -0.4
Or see this region's nucleotide sequence