Experiment: Octanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS11675 and ABZR87_RS11680 are separated by 16 nucleotides ABZR87_RS11680 and ABZR87_RS11685 overlap by 18 nucleotides ABZR87_RS11685 and ABZR87_RS11690 are separated by 31 nucleotides
ABZR87_RS11675: ABZR87_RS11675 - disulfide bond formation protein B, at 2,474,634 to 2,475,113
_RS11675
ABZR87_RS11680: ABZR87_RS11680 - DUF523 domain-containing protein, at 2,475,130 to 2,475,657
_RS11680
ABZR87_RS11685: ABZR87_RS11685 - CaiB/BaiF CoA-transferase family protein, at 2,475,640 to 2,476,746
_RS11685
ABZR87_RS11690: ABZR87_RS11690 - ATP-binding cassette domain-containing protein, at 2,476,778 to 2,478,715
_RS11690
Position (kb)
2475
2476
2477 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2474.707 kb on - strand, within ABZR87_RS11675 at 2474.884 kb on + strand, within ABZR87_RS11675 at 2474.884 kb on + strand, within ABZR87_RS11675 at 2474.885 kb on - strand, within ABZR87_RS11675 at 2474.885 kb on - strand, within ABZR87_RS11675 at 2475.990 kb on - strand, within ABZR87_RS11685 at 2475.991 kb on + strand, within ABZR87_RS11685 at 2475.991 kb on + strand, within ABZR87_RS11685 at 2475.991 kb on + strand, within ABZR87_RS11685 at 2475.992 kb on - strand, within ABZR87_RS11685 at 2475.992 kb on - strand, within ABZR87_RS11685 at 2475.992 kb on - strand, within ABZR87_RS11685 at 2476.111 kb on + strand, within ABZR87_RS11685 at 2476.111 kb on + strand, within ABZR87_RS11685 at 2476.111 kb on + strand, within ABZR87_RS11685 at 2476.112 kb on - strand, within ABZR87_RS11685 at 2476.112 kb on - strand, within ABZR87_RS11685 at 2476.280 kb on + strand, within ABZR87_RS11685 at 2476.280 kb on + strand, within ABZR87_RS11685 at 2476.280 kb on + strand, within ABZR87_RS11685 at 2476.281 kb on - strand, within ABZR87_RS11685 at 2476.287 kb on + strand, within ABZR87_RS11685 at 2476.288 kb on - strand, within ABZR87_RS11685 at 2476.589 kb on + strand, within ABZR87_RS11685 at 2476.589 kb on + strand, within ABZR87_RS11685 at 2476.903 kb on - strand at 2477.563 kb on - strand, within ABZR87_RS11690
Per-strain Table
Position Strand Gene LocusTag Fraction Octanoic (C) remove 2,474,707 - ABZR87_RS11675 0.15 +0.7 2,474,884 + ABZR87_RS11675 0.52 +1.7 2,474,884 + ABZR87_RS11675 0.52 -1.4 2,474,885 - ABZR87_RS11675 0.52 -0.7 2,474,885 - ABZR87_RS11675 0.52 -2.2 2,475,990 - ABZR87_RS11685 0.32 -0.0 2,475,991 + ABZR87_RS11685 0.32 +0.6 2,475,991 + ABZR87_RS11685 0.32 +1.0 2,475,991 + ABZR87_RS11685 0.32 -1.7 2,475,992 - ABZR87_RS11685 0.32 -0.3 2,475,992 - ABZR87_RS11685 0.32 -1.7 2,475,992 - ABZR87_RS11685 0.32 +1.0 2,476,111 + ABZR87_RS11685 0.43 -2.7 2,476,111 + ABZR87_RS11685 0.43 +3.1 2,476,111 + ABZR87_RS11685 0.43 -0.2 2,476,112 - ABZR87_RS11685 0.43 -2.3 2,476,112 - ABZR87_RS11685 0.43 -3.3 2,476,280 + ABZR87_RS11685 0.58 +2.1 2,476,280 + ABZR87_RS11685 0.58 -0.1 2,476,280 + ABZR87_RS11685 0.58 +2.3 2,476,281 - ABZR87_RS11685 0.58 -1.2 2,476,287 + ABZR87_RS11685 0.58 -1.8 2,476,288 - ABZR87_RS11685 0.59 +1.6 2,476,589 + ABZR87_RS11685 0.86 +2.1 2,476,589 + ABZR87_RS11685 0.86 +0.3 2,476,903 - +2.1 2,477,563 - ABZR87_RS11690 0.41 -1.5
Or see this region's nucleotide sequence