Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05940

Experiment: Octanoic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Octanoic (C)
1,269,124	+		ABZR87_RS05930	0.75	-0.3
1,269,125	-		ABZR87_RS05930	0.76	-0.6
1,269,125	-		ABZR87_RS05930	0.76	-1.6
1,269,193	+		ABZR87_RS05930	0.80	+0.2
1,269,193	+		ABZR87_RS05930	0.80	-0.3
1,269,193	+		ABZR87_RS05930	0.80	+0.0
1,269,194	-		ABZR87_RS05930	0.80	-2.9
1,269,194	-		ABZR87_RS05930	0.80	+1.3
1,269,194	-		ABZR87_RS05930	0.80	-0.2
1,269,194	-		ABZR87_RS05930	0.80	+2.3
1,269,194	-		ABZR87_RS05930	0.80	-0.7
1,269,194	-		ABZR87_RS05930	0.80	-0.2
1,269,220	+		ABZR87_RS05930	0.81	-2.4
1,269,220	+		ABZR87_RS05930	0.81	-1.2
1,269,220	+		ABZR87_RS05930	0.81	-2.4
1,269,220	+		ABZR87_RS05930	0.81	+2.0
1,269,220	+		ABZR87_RS05930	0.81	+0.8
1,269,221	-		ABZR87_RS05930	0.82	-4.6
1,269,221	-		ABZR87_RS05930	0.82	+0.1
1,269,221	-		ABZR87_RS05930	0.82	+2.7
1,269,221	-		ABZR87_RS05930	0.82	+1.5
1,269,250	+		ABZR87_RS05930	0.83	-1.5
1,269,250	+		ABZR87_RS05930	0.83	-0.6
1,269,250	+		ABZR87_RS05930	0.83	-0.2
1,269,251	-		ABZR87_RS05930	0.83	+0.2
1,269,251	-		ABZR87_RS05930	0.83	+0.3
1,269,251	-		ABZR87_RS05930	0.83	-0.8
1,269,469	+				+0.6
1,269,469	+				-0.1
1,269,469	+				+0.2
1,269,469	+				-0.8
1,269,469	+				-0.9
1,269,470	-				-3.9
1,269,548	+				-2.9
1,269,554	+				-3.3
1,269,555	-				-0.8
1,269,555	-				-0.2
1,269,555	-				+2.1
1,269,677	+				-0.1
1,269,678	-				-2.9
1,269,721	+				-1.0
1,269,722	-				+0.1
1,269,917	+		ABZR87_RS05935	0.50	+1.2
1,269,917	+		ABZR87_RS05935	0.50	-1.8
1,269,918	-		ABZR87_RS05935	0.50	+2.5
1,269,920	+		ABZR87_RS05935	0.51	-1.9
1,269,920	+		ABZR87_RS05935	0.51	-3.2
1,269,920	+		ABZR87_RS05935	0.51	-0.7
1,269,921	-		ABZR87_RS05935	0.51	+3.4
1,269,921	-		ABZR87_RS05935	0.51	-2.3
1,269,921	-		ABZR87_RS05935	0.51	-2.0
1,269,921	-		ABZR87_RS05935	0.51	+0.4
1,269,921	-		ABZR87_RS05935	0.51	-1.0
1,269,935	+		ABZR87_RS05935	0.54	-0.8
1,269,935	+		ABZR87_RS05935	0.54	-0.8
1,269,936	-		ABZR87_RS05935	0.55	-1.0
1,269,936	-		ABZR87_RS05935	0.55	-1.2
1,269,936	-		ABZR87_RS05935	0.55	+0.6
1,269,995	+		ABZR87_RS05935	0.69	-3.6
1,269,995	+		ABZR87_RS05935	0.69	-2.8
1,269,996	-		ABZR87_RS05935	0.69	-3.8
1,269,996	-		ABZR87_RS05935	0.69	-1.7
1,269,996	-		ABZR87_RS05935	0.69	-2.7
1,270,013	+		ABZR87_RS05935	0.73	+0.6
1,270,013	+		ABZR87_RS05935	0.73	-1.7
1,270,014	-		ABZR87_RS05935	0.73	+0.2
1,270,014	-		ABZR87_RS05935	0.73	-2.8
1,270,014	-		ABZR87_RS05935	0.73	-1.2
1,270,014	-		ABZR87_RS05935	0.73	-0.7
1,270,014	-		ABZR87_RS05935	0.73	-0.6
1,270,014	-		ABZR87_RS05935	0.73	-2.5
1,270,014	-		ABZR87_RS05935	0.73	+0.9
1,270,016	-		ABZR87_RS05935	0.74	-0.6
1,270,129	+				+0.2
1,270,129	+				+0.4
1,270,129	+				-0.6
1,270,129	+				+1.5
1,270,130	-				+3.5
1,270,130	-				-0.1
1,270,130	-				-1.2
1,270,130	-				+0.2
1,270,130	-				+1.2
1,270,130	-				-0.4
1,270,190	+				-0.0
1,270,282	-		ABZR87_RS05940	0.13	+0.8
1,270,377	+		ABZR87_RS05940	0.21	+1.7
1,270,377	+		ABZR87_RS05940	0.21	-1.2
1,270,458	+		ABZR87_RS05940	0.28	+1.2
1,270,562	-		ABZR87_RS05940	0.36	+0.5
1,270,562	-		ABZR87_RS05940	0.36	+1.8
1,270,562	-		ABZR87_RS05940	0.36	+1.7
1,270,588	+		ABZR87_RS05940	0.39	-1.0
1,270,588	+		ABZR87_RS05940	0.39	-1.0
1,270,588	+		ABZR87_RS05940	0.39	+1.1
1,270,589	-		ABZR87_RS05940	0.39	+0.3
1,270,589	-		ABZR87_RS05940	0.39	+1.5
1,270,589	-		ABZR87_RS05940	0.39	+2.6
1,270,589	-		ABZR87_RS05940	0.39	+1.8
1,270,780	+		ABZR87_RS05940	0.54	+1.0
1,270,814	-		ABZR87_RS05940	0.57	+2.1
1,270,954	+		ABZR87_RS05940	0.69	+0.7
1,270,954	+		ABZR87_RS05940	0.69	+1.5
1,270,954	+		ABZR87_RS05940	0.69	-2.1
1,270,954	+		ABZR87_RS05940	0.69	+2.6
1,270,954	+		ABZR87_RS05940	0.69	-2.5
1,270,954	+		ABZR87_RS05940	0.69	+1.7
1,270,955	-		ABZR87_RS05940	0.69	-1.2
1,270,955	-		ABZR87_RS05940	0.69	+0.8
1,270,955	-		ABZR87_RS05940	0.69	+0.5
1,270,955	-		ABZR87_RS05940	0.69	+0.4
1,270,955	-		ABZR87_RS05940	0.69	-2.3
1,270,955	-		ABZR87_RS05940	0.69	+3.2
1,271,075	+		ABZR87_RS05940	0.79	-0.7
1,271,076	-		ABZR87_RS05940	0.79	-0.1
1,271,076	-		ABZR87_RS05940	0.79	+0.1
1,271,163	+		ABZR87_RS05940	0.86	+1.8
1,271,163	+		ABZR87_RS05940	0.86	-1.7
1,271,245	+				-0.5
1,271,245	+				+2.5
1,271,245	+				+1.3
1,271,246	-				-1.2
1,271,246	-				-1.8
1,271,246	-				+0.7
1,271,246	-				-2.8
1,271,332	+				+1.6
1,271,345	+				-0.9
1,271,345	+				-1.7
1,271,345	+				-2.8
1,271,345	+				-0.6
1,271,345	+				-2.4
1,271,346	-				-2.5
1,271,346	-				-0.8
1,271,346	-				+1.6
1,271,346	-				+0.6
1,271,346	-				+0.6
1,271,461	-		ABZR87_RS05945	0.20	-0.6
1,271,461	-		ABZR87_RS05945	0.20	+2.6
1,271,461	-		ABZR87_RS05945	0.20	-3.1
1,271,483	+		ABZR87_RS05945	0.24	+0.4
1,271,483	+		ABZR87_RS05945	0.24	-2.0
1,271,483	+		ABZR87_RS05945	0.24	-1.9
1,271,485	-		ABZR87_RS05945	0.24	-3.1
1,271,604	+		ABZR87_RS05945	0.45	+0.8
1,271,604	+		ABZR87_RS05945	0.45	-0.6
1,271,693	+		ABZR87_RS05945	0.60	-1.5
1,271,693	+		ABZR87_RS05945	0.60	-3.7
1,271,693	+		ABZR87_RS05945	0.60	-1.7
1,271,693	+		ABZR87_RS05945	0.60	-2.9
1,271,694	-		ABZR87_RS05945	0.60	+1.1
1,271,694	-		ABZR87_RS05945	0.60	+1.6
1,271,694	-		ABZR87_RS05945	0.60	-0.4
1,271,694	-		ABZR87_RS05945	0.60	-1.3
1,271,728	+		ABZR87_RS05945	0.66	-3.1
1,271,728	+		ABZR87_RS05945	0.66	-1.1
1,271,729	-		ABZR87_RS05945	0.66	+2.4
1,271,729	-		ABZR87_RS05945	0.66	+1.3
1,271,744	-		ABZR87_RS05945	0.69	-0.6
1,271,819	+		ABZR87_RS05945	0.82	+1.4
1,271,820	-		ABZR87_RS05945	0.82	+2.1
1,271,823	+		ABZR87_RS05945	0.82	-3.0
1,271,823	+		ABZR87_RS05945	0.82	-4.0
1,271,823	+		ABZR87_RS05945	0.82	+2.2
1,271,823	+		ABZR87_RS05945	0.82	-1.8
1,271,824	-		ABZR87_RS05945	0.83	-2.3
1,271,824	-		ABZR87_RS05945	0.83	-2.7
1,271,888	+				-0.5
1,271,889	-				+1.6
1,271,889	-				-0.2
1,271,889	-				-3.6
1,271,958	+				-2.7
1,271,958	+				+0.1
1,271,959	-				+0.8
1,271,959	-				+0.0
1,271,959	-				-0.4
1,271,998	-				-1.4
1,271,998	-				+0.0
1,272,010	+				+2.3
1,272,010	+				+1.3
1,272,010	+				-1.2
1,272,011	-				-2.8
1,272,011	-				+1.2
1,272,011	-				-1.2
1,272,169	+		ABZR87_RS05950	0.21	-0.9
1,272,170	-		ABZR87_RS05950	0.21	-0.8
1,272,190	+		ABZR87_RS05950	0.24	-0.2
1,272,190	+		ABZR87_RS05950	0.24	-3.4
1,272,190	+		ABZR87_RS05950	0.24	+1.0
1,272,190	+		ABZR87_RS05950	0.24	-1.9
1,272,191	-		ABZR87_RS05950	0.24	+1.2
1,272,191	-		ABZR87_RS05950	0.24	+0.0
1,272,191	-		ABZR87_RS05950	0.24	+0.3
1,272,191	-		ABZR87_RS05950	0.24	+1.3
1,272,191	-		ABZR87_RS05950	0.24	-3.0