Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS02025

Experiment: Octanoic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS02020 and ABZR87_RS02025 are separated by 151 nucleotidesABZR87_RS02025 and ABZR87_RS02030 are separated by 10 nucleotides ABZR87_RS02020: ABZR87_RS02020 - long-chain fatty acid--CoA ligase, at 430,061 to 431,770 _RS02020 ABZR87_RS02025: ABZR87_RS02025 - aminopeptidase, at 431,922 to 433,019 _RS02025 ABZR87_RS02030: ABZR87_RS02030 - molybdopterin oxidoreductase family protein, at 433,030 to 435,126 _RS02030 Position (kb) 431 432 433 434Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1 2 3 4 5at 430.962 kb on + strand, within ABZR87_RS02020at 430.962 kb on + strand, within ABZR87_RS02020at 430.963 kb on - strand, within ABZR87_RS02020at 430.963 kb on - strand, within ABZR87_RS02020at 430.963 kb on - strand, within ABZR87_RS02020at 430.963 kb on - strand, within ABZR87_RS02020at 430.963 kb on - strand, within ABZR87_RS02020at 431.136 kb on + strand, within ABZR87_RS02020at 431.136 kb on + strand, within ABZR87_RS02020at 431.136 kb on + strand, within ABZR87_RS02020at 431.136 kb on + strand, within ABZR87_RS02020at 431.137 kb on - strand, within ABZR87_RS02020at 431.137 kb on - strand, within ABZR87_RS02020at 431.350 kb on + strand, within ABZR87_RS02020at 431.451 kb on + strand, within ABZR87_RS02020at 431.451 kb on + strand, within ABZR87_RS02020at 431.452 kb on - strand, within ABZR87_RS02020at 431.452 kb on - strand, within ABZR87_RS02020at 431.452 kb on - strand, within ABZR87_RS02020at 431.478 kb on + strand, within ABZR87_RS02020at 431.478 kb on + strand, within ABZR87_RS02020at 431.479 kb on - strand, within ABZR87_RS02020at 431.514 kb on + strand, within ABZR87_RS02020at 431.514 kb on + strand, within ABZR87_RS02020at 431.515 kb on - strand, within ABZR87_RS02020at 431.605 kb on + strandat 431.605 kb on + strandat 431.606 kb on - strandat 431.606 kb on - strandat 431.619 kb on + strandat 431.620 kb on - strandat 431.620 kb on - strandat 431.620 kb on - strandat 431.620 kb on - strandat 431.706 kb on + strandat 431.706 kb on + strandat 431.746 kb on - strandat 431.764 kb on + strandat 431.764 kb on + strandat 431.764 kb on + strandat 431.765 kb on - strandat 431.832 kb on + strandat 431.832 kb on + strandat 431.832 kb on + strandat 431.832 kb on + strandat 431.833 kb on - strandat 431.857 kb on + strandat 431.857 kb on + strandat 431.863 kb on - strandat 431.863 kb on - strandat 431.863 kb on - strandat 431.863 kb on - strandat 431.863 kb on - strandat 431.863 kb on - strandat 431.863 kb on - strandat 431.967 kb on + strandat 431.967 kb on + strandat 431.968 kb on - strandat 432.031 kb on + strandat 432.031 kb on + strandat 432.031 kb on + strandat 432.032 kb on - strand, within ABZR87_RS02025at 432.032 kb on - strand, within ABZR87_RS02025at 432.032 kb on - strand, within ABZR87_RS02025at 432.064 kb on + strand, within ABZR87_RS02025at 432.065 kb on - strand, within ABZR87_RS02025at 432.065 kb on - strand, within ABZR87_RS02025at 432.065 kb on - strand, within ABZR87_RS02025at 432.065 kb on - strand, within ABZR87_RS02025at 432.065 kb on - strand, within ABZR87_RS02025at 432.097 kb on + strand, within ABZR87_RS02025at 432.097 kb on + strand, within ABZR87_RS02025at 432.097 kb on + strand, within ABZR87_RS02025at 432.097 kb on + strand, within ABZR87_RS02025at 432.161 kb on + strand, within ABZR87_RS02025at 432.162 kb on - strand, within ABZR87_RS02025at 432.162 kb on - strand, within ABZR87_RS02025at 432.162 kb on - strand, within ABZR87_RS02025at 432.162 kb on - strand, within ABZR87_RS02025at 432.164 kb on - strand, within ABZR87_RS02025at 432.164 kb on - strand, within ABZR87_RS02025at 432.164 kb on - strand, within ABZR87_RS02025at 432.193 kb on + strand, within ABZR87_RS02025at 432.193 kb on + strand, within ABZR87_RS02025at 432.193 kb on + strand, within ABZR87_RS02025at 432.265 kb on + strand, within ABZR87_RS02025at 432.265 kb on + strand, within ABZR87_RS02025at 432.265 kb on + strand, within ABZR87_RS02025at 432.265 kb on + strand, within ABZR87_RS02025at 432.265 kb on + strand, within ABZR87_RS02025at 432.266 kb on - strand, within ABZR87_RS02025at 432.266 kb on - strand, within ABZR87_RS02025at 432.266 kb on - strand, within ABZR87_RS02025at 432.266 kb on - strand, within ABZR87_RS02025at 432.266 kb on - strand, within ABZR87_RS02025at 432.266 kb on - strand, within ABZR87_RS02025at 432.315 kb on + strand, within ABZR87_RS02025at 432.315 kb on + strand, within ABZR87_RS02025at 432.316 kb on - strand, within ABZR87_RS02025at 432.331 kb on + strand, within ABZR87_RS02025at 432.331 kb on + strand, within ABZR87_RS02025at 432.331 kb on + strand, within ABZR87_RS02025at 432.331 kb on + strand, within ABZR87_RS02025at 432.331 kb on + strand, within ABZR87_RS02025at 432.332 kb on - strand, within ABZR87_RS02025at 432.332 kb on - strand, within ABZR87_RS02025at 432.332 kb on - strand, within ABZR87_RS02025at 432.332 kb on - strand, within ABZR87_RS02025at 432.332 kb on - strand, within ABZR87_RS02025at 432.332 kb on - strand, within ABZR87_RS02025at 432.332 kb on - strand, within ABZR87_RS02025at 432.340 kb on + strand, within ABZR87_RS02025at 432.341 kb on - strand, within ABZR87_RS02025at 432.341 kb on - strand, within ABZR87_RS02025at 432.435 kb on - strand, within ABZR87_RS02025at 432.448 kb on + strand, within ABZR87_RS02025at 432.449 kb on - strand, within ABZR87_RS02025at 432.449 kb on - strand, within ABZR87_RS02025at 432.542 kb on - strand, within ABZR87_RS02025at 432.542 kb on - strand, within ABZR87_RS02025at 432.542 kb on - strand, within ABZR87_RS02025at 432.600 kb on + strand, within ABZR87_RS02025at 432.600 kb on + strand, within ABZR87_RS02025at 432.600 kb on + strand, within ABZR87_RS02025at 432.601 kb on - strand, within ABZR87_RS02025at 432.613 kb on + strand, within ABZR87_RS02025at 432.614 kb on - strand, within ABZR87_RS02025at 432.614 kb on - strand, within ABZR87_RS02025at 432.614 kb on - strand, within ABZR87_RS02025at 432.618 kb on + strand, within ABZR87_RS02025at 432.619 kb on - strand, within ABZR87_RS02025at 432.637 kb on + strand, within ABZR87_RS02025at 432.637 kb on + strand, within ABZR87_RS02025at 432.638 kb on - strand, within ABZR87_RS02025at 432.638 kb on - strand, within ABZR87_RS02025at 432.649 kb on + strand, within ABZR87_RS02025at 432.650 kb on - strand, within ABZR87_RS02025at 432.650 kb on - strand, within ABZR87_RS02025at 432.754 kb on + strand, within ABZR87_RS02025at 432.754 kb on + strand, within ABZR87_RS02025at 432.755 kb on - strand, within ABZR87_RS02025at 432.763 kb on + strand, within ABZR87_RS02025at 432.764 kb on - strand, within ABZR87_RS02025at 432.802 kb on + strand, within ABZR87_RS02025at 432.802 kb on + strand, within ABZR87_RS02025at 432.802 kb on + strand, within ABZR87_RS02025at 432.802 kb on + strand, within ABZR87_RS02025at 432.802 kb on + strand, within ABZR87_RS02025at 432.802 kb on + strand, within ABZR87_RS02025at 432.802 kb on - strand, within ABZR87_RS02025at 432.803 kb on - strand, within ABZR87_RS02025at 432.803 kb on - strand, within ABZR87_RS02025at 432.803 kb on - strand, within ABZR87_RS02025at 432.934 kb on + strandat 432.934 kb on + strandat 432.935 kb on - strandat 432.935 kb on - strandat 432.935 kb on - strandat 432.935 kb on - strandat 432.937 kb on + strandat 432.937 kb on + strandat 432.937 kb on + strandat 432.937 kb on + strandat 432.938 kb on - strandat 432.938 kb on - strandat 432.938 kb on - strandat 432.938 kb on - strandat 432.938 kb on - strandat 432.938 kb on - strandat 432.938 kb on - strandat 432.940 kb on + strandat 432.941 kb on - strandat 433.073 kb on + strandat 433.073 kb on + strandat 433.073 kb on + strandat 433.074 kb on - strandat 433.074 kb on - strandat 433.074 kb on - strandat 433.074 kb on - strandat 433.074 kb on - strandat 433.074 kb on - strandat 433.074 kb on - strandat 433.074 kb on - strandat 433.074 kb on - strandat 433.074 kb on - strandat 433.451 kb on + strand, within ABZR87_RS02030at 433.451 kb on + strand, within ABZR87_RS02030at 433.451 kb on + strand, within ABZR87_RS02030at 433.451 kb on + strand, within ABZR87_RS02030at 433.451 kb on + strand, within ABZR87_RS02030at 433.451 kb on + strand, within ABZR87_RS02030at 433.452 kb on - strand, within ABZR87_RS02030at 433.452 kb on - strand, within ABZR87_RS02030at 433.452 kb on - strand, within ABZR87_RS02030at 433.496 kb on + strand, within ABZR87_RS02030at 433.681 kb on - strand, within ABZR87_RS02030at 433.715 kb on + strand, within ABZR87_RS02030at 433.772 kb on + strand, within ABZR87_RS02030at 433.773 kb on - strand, within ABZR87_RS02030at 433.773 kb on - strand, within ABZR87_RS02030at 433.773 kb on - strand, within ABZR87_RS02030at 433.773 kb on - strand, within ABZR87_RS02030at 433.773 kb on - strand, within ABZR87_RS02030at 433.773 kb on - strand, within ABZR87_RS02030at 433.773 kb on - strand, within ABZR87_RS02030at 433.784 kb on + strand, within ABZR87_RS02030at 433.784 kb on + strand, within ABZR87_RS02030at 433.785 kb on - strand, within ABZR87_RS02030at 433.785 kb on - strand, within ABZR87_RS02030at 433.785 kb on - strand, within ABZR87_RS02030at 433.785 kb on - strand, within ABZR87_RS02030at 433.785 kb on - strand, within ABZR87_RS02030at 433.785 kb on - strand, within ABZR87_RS02030at 433.845 kb on - strand, within ABZR87_RS02030at 433.845 kb on - strand, within ABZR87_RS02030at 433.958 kb on + strand, within ABZR87_RS02030at 433.959 kb on - strand, within ABZR87_RS02030at 433.959 kb on - strand, within ABZR87_RS02030

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Per-strain Table

Position Strand Gene LocusTag Fraction Octanoic (C)
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430,962 + ABZR87_RS02020 0.53 -2.6
430,962 + ABZR87_RS02020 0.53 -2.0
430,963 - ABZR87_RS02020 0.53 -1.5
430,963 - ABZR87_RS02020 0.53 -4.3
430,963 - ABZR87_RS02020 0.53 -2.4
430,963 - ABZR87_RS02020 0.53 -2.8
430,963 - ABZR87_RS02020 0.53 -1.2
431,136 + ABZR87_RS02020 0.63 -1.9
431,136 + ABZR87_RS02020 0.63 -3.8
431,136 + ABZR87_RS02020 0.63 -2.6
431,136 + ABZR87_RS02020 0.63 -1.6
431,137 - ABZR87_RS02020 0.63 -2.4
431,137 - ABZR87_RS02020 0.63 -3.9
431,350 + ABZR87_RS02020 0.75 -2.9
431,451 + ABZR87_RS02020 0.81 -3.8
431,451 + ABZR87_RS02020 0.81 -2.5
431,452 - ABZR87_RS02020 0.81 -2.8
431,452 - ABZR87_RS02020 0.81 -3.4
431,452 - ABZR87_RS02020 0.81 -0.6
431,478 + ABZR87_RS02020 0.83 -2.7
431,478 + ABZR87_RS02020 0.83 -2.5
431,479 - ABZR87_RS02020 0.83 -1.9
431,514 + ABZR87_RS02020 0.85 -3.2
431,514 + ABZR87_RS02020 0.85 -2.2
431,515 - ABZR87_RS02020 0.85 -4.1
431,605 + -1.7
431,605 + -0.9
431,606 - -1.6
431,606 - -5.0
431,619 + -3.5
431,620 - -2.1
431,620 - -3.2
431,620 - -3.6
431,620 - -3.0
431,706 + -2.2
431,706 + -3.2
431,746 - -2.6
431,764 + -3.3
431,764 + -2.5
431,764 + -2.2
431,765 - -0.1
431,832 + -3.3
431,832 + -3.0
431,832 + -2.6
431,832 + -1.7
431,833 - +3.4
431,857 + -3.7
431,857 + -4.0
431,863 - +5.2
431,863 - +4.4
431,863 - +3.9
431,863 - +2.8
431,863 - +4.9
431,863 - +4.3
431,863 - +4.1
431,967 + -2.6
431,967 + -4.5
431,968 - +5.4
432,031 + -1.7
432,031 + -2.9
432,031 + -1.8
432,032 - ABZR87_RS02025 0.10 +3.7
432,032 - ABZR87_RS02025 0.10 +4.6
432,032 - ABZR87_RS02025 0.10 +4.0
432,064 + ABZR87_RS02025 0.13 -3.1
432,065 - ABZR87_RS02025 0.13 +5.7
432,065 - ABZR87_RS02025 0.13 +4.6
432,065 - ABZR87_RS02025 0.13 +4.1
432,065 - ABZR87_RS02025 0.13 +4.2
432,065 - ABZR87_RS02025 0.13 +3.1
432,097 + ABZR87_RS02025 0.16 -1.9
432,097 + ABZR87_RS02025 0.16 -2.2
432,097 + ABZR87_RS02025 0.16 -3.3
432,097 + ABZR87_RS02025 0.16 -1.4
432,161 + ABZR87_RS02025 0.22 -2.1
432,162 - ABZR87_RS02025 0.22 +5.0
432,162 - ABZR87_RS02025 0.22 +4.6
432,162 - ABZR87_RS02025 0.22 +3.2
432,162 - ABZR87_RS02025 0.22 +4.4
432,164 - ABZR87_RS02025 0.22 +3.8
432,164 - ABZR87_RS02025 0.22 +5.1
432,164 - ABZR87_RS02025 0.22 +3.0
432,193 + ABZR87_RS02025 0.25 -4.0
432,193 + ABZR87_RS02025 0.25 -0.5
432,193 + ABZR87_RS02025 0.25 +0.3
432,265 + ABZR87_RS02025 0.31 +1.9
432,265 + ABZR87_RS02025 0.31 +0.9
432,265 + ABZR87_RS02025 0.31 -1.5
432,265 + ABZR87_RS02025 0.31 -1.2
432,265 + ABZR87_RS02025 0.31 -2.0
432,266 - ABZR87_RS02025 0.31 +3.2
432,266 - ABZR87_RS02025 0.31 +3.2
432,266 - ABZR87_RS02025 0.31 +4.5
432,266 - ABZR87_RS02025 0.31 +3.8
432,266 - ABZR87_RS02025 0.31 +4.5
432,266 - ABZR87_RS02025 0.31 +4.0
432,315 + ABZR87_RS02025 0.36 +2.1
432,315 + ABZR87_RS02025 0.36 +3.4
432,316 - ABZR87_RS02025 0.36 +3.5
432,331 + ABZR87_RS02025 0.37 -3.3
432,331 + ABZR87_RS02025 0.37 -2.5
432,331 + ABZR87_RS02025 0.37 -1.7
432,331 + ABZR87_RS02025 0.37 -4.0
432,331 + ABZR87_RS02025 0.37 +0.3
432,332 - ABZR87_RS02025 0.37 +3.8
432,332 - ABZR87_RS02025 0.37 +2.6
432,332 - ABZR87_RS02025 0.37 +4.9
432,332 - ABZR87_RS02025 0.37 +4.9
432,332 - ABZR87_RS02025 0.37 +4.1
432,332 - ABZR87_RS02025 0.37 +3.1
432,332 - ABZR87_RS02025 0.37 +4.1
432,340 + ABZR87_RS02025 0.38 -2.0
432,341 - ABZR87_RS02025 0.38 +3.7
432,341 - ABZR87_RS02025 0.38 +4.4
432,435 - ABZR87_RS02025 0.47 +3.9
432,448 + ABZR87_RS02025 0.48 -0.1
432,449 - ABZR87_RS02025 0.48 +4.7
432,449 - ABZR87_RS02025 0.48 +3.5
432,542 - ABZR87_RS02025 0.56 +4.6
432,542 - ABZR87_RS02025 0.56 +4.1
432,542 - ABZR87_RS02025 0.56 +3.1
432,600 + ABZR87_RS02025 0.62 +1.9
432,600 + ABZR87_RS02025 0.62 +0.1
432,600 + ABZR87_RS02025 0.62 +0.3
432,601 - ABZR87_RS02025 0.62 +2.4
432,613 + ABZR87_RS02025 0.63 -1.6
432,614 - ABZR87_RS02025 0.63 +3.8
432,614 - ABZR87_RS02025 0.63 +1.8
432,614 - ABZR87_RS02025 0.63 +3.9
432,618 + ABZR87_RS02025 0.63 -2.1
432,619 - ABZR87_RS02025 0.63 -0.9
432,637 + ABZR87_RS02025 0.65 +0.1
432,637 + ABZR87_RS02025 0.65 -3.1
432,638 - ABZR87_RS02025 0.65 +4.2
432,638 - ABZR87_RS02025 0.65 +3.0
432,649 + ABZR87_RS02025 0.66 -2.8
432,650 - ABZR87_RS02025 0.66 +4.0
432,650 - ABZR87_RS02025 0.66 +3.2
432,754 + ABZR87_RS02025 0.76 -1.1
432,754 + ABZR87_RS02025 0.76 -0.4
432,755 - ABZR87_RS02025 0.76 +0.1
432,763 + ABZR87_RS02025 0.77 -3.9
432,764 - ABZR87_RS02025 0.77 +3.9
432,802 + ABZR87_RS02025 0.80 -1.6
432,802 + ABZR87_RS02025 0.80 +0.8
432,802 + ABZR87_RS02025 0.80 +2.3
432,802 + ABZR87_RS02025 0.80 -0.7
432,802 + ABZR87_RS02025 0.80 +0.3
432,802 + ABZR87_RS02025 0.80 -0.1
432,802 - ABZR87_RS02025 0.80 +2.7
432,803 - ABZR87_RS02025 0.80 +2.5
432,803 - ABZR87_RS02025 0.80 +2.9
432,803 - ABZR87_RS02025 0.80 +4.8
432,934 + -2.5
432,934 + -1.7
432,935 - +0.9
432,935 - +1.1
432,935 - +2.5
432,935 - +1.8
432,937 + -2.2
432,937 + +0.3
432,937 + -0.7
432,937 + +0.6
432,938 - +3.8
432,938 - +2.4
432,938 - +2.9
432,938 - +3.9
432,938 - +2.6
432,938 - +2.8
432,938 - +2.0
432,940 + -1.0
432,941 - +1.6
433,073 + +3.4
433,073 + +2.4
433,073 + -2.1
433,074 - +4.0
433,074 - +2.4
433,074 - -1.2
433,074 - +2.3
433,074 - +3.9
433,074 - +2.8
433,074 - +3.6
433,074 - +0.3
433,074 - +2.3
433,074 - +2.3
433,451 + ABZR87_RS02030 0.20 -3.7
433,451 + ABZR87_RS02030 0.20 -0.2
433,451 + ABZR87_RS02030 0.20 -0.2
433,451 + ABZR87_RS02030 0.20 -2.3
433,451 + ABZR87_RS02030 0.20 +3.4
433,451 + ABZR87_RS02030 0.20 -0.8
433,452 - ABZR87_RS02030 0.20 -0.9
433,452 - ABZR87_RS02030 0.20 +1.2
433,452 - ABZR87_RS02030 0.20 +1.5
433,496 + ABZR87_RS02030 0.22 -1.2
433,681 - ABZR87_RS02030 0.31 -0.7
433,715 + ABZR87_RS02030 0.33 +1.9
433,772 + ABZR87_RS02030 0.35 -1.2
433,773 - ABZR87_RS02030 0.35 -2.5
433,773 - ABZR87_RS02030 0.35 +2.4
433,773 - ABZR87_RS02030 0.35 +5.0
433,773 - ABZR87_RS02030 0.35 -0.2
433,773 - ABZR87_RS02030 0.35 -0.4
433,773 - ABZR87_RS02030 0.35 +2.6
433,773 - ABZR87_RS02030 0.35 -1.9
433,784 + ABZR87_RS02030 0.36 -0.7
433,784 + ABZR87_RS02030 0.36 -0.4
433,785 - ABZR87_RS02030 0.36 -2.1
433,785 - ABZR87_RS02030 0.36 -0.3
433,785 - ABZR87_RS02030 0.36 -0.6
433,785 - ABZR87_RS02030 0.36 +1.3
433,785 - ABZR87_RS02030 0.36 -2.2
433,785 - ABZR87_RS02030 0.36 +2.0
433,845 - ABZR87_RS02030 0.39 +0.3
433,845 - ABZR87_RS02030 0.39 +1.6
433,958 + ABZR87_RS02030 0.44 -0.7
433,959 - ABZR87_RS02030 0.44 -2.2
433,959 - ABZR87_RS02030 0.44 +0.6

Or see this region's nucleotide sequence