Experiment: KB with Conessine 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4855 and Psyr_4856 are separated by 51 nucleotides Psyr_4856 and Psyr_4857 overlap by 4 nucleotides Psyr_4857 and Psyr_4858 are separated by 270 nucleotides
Psyr_4855: Psyr_4855 - conserved hypothetical protein, at 5,762,058 to 5,762,816
_4855
Psyr_4856: Psyr_4856 - conserved hypothetical protein, at 5,762,868 to 5,763,059
_4856
Psyr_4857: Psyr_4857 - conserved hypothetical protein, at 5,763,056 to 5,763,997
_4857
Psyr_4858: Psyr_4858 - Penicillin amidase, at 5,764,268 to 5,766,655
_4858
Position (kb) 5763
5764 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5762.118 kb on + strand at 5762.118 kb on + strand at 5762.118 kb on + strand at 5762.118 kb on + strand at 5762.118 kb on + strand at 5762.130 kb on + strand at 5762.130 kb on + strand at 5762.130 kb on + strand at 5762.130 kb on + strand at 5762.131 kb on - strand at 5762.131 kb on - strand at 5762.131 kb on - strand at 5762.131 kb on - strand at 5762.131 kb on - strand at 5762.131 kb on - strand at 5762.131 kb on - strand at 5762.200 kb on - strand, within Psyr_4855 at 5762.226 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.661 kb on + strand, within Psyr_4855 at 5762.662 kb on - strand, within Psyr_4855 at 5762.662 kb on - strand, within Psyr_4855 at 5762.662 kb on - strand, within Psyr_4855 at 5762.662 kb on - strand, within Psyr_4855 at 5762.662 kb on - strand, within Psyr_4855 at 5762.736 kb on + strand, within Psyr_4855 at 5762.736 kb on + strand, within Psyr_4855 at 5762.740 kb on - strand, within Psyr_4855 at 5762.815 kb on - strand at 5762.815 kb on - strand at 5762.867 kb on + strand at 5762.867 kb on + strand at 5762.867 kb on + strand at 5762.867 kb on + strand at 5762.867 kb on + strand at 5762.868 kb on - strand at 5762.905 kb on + strand, within Psyr_4856 at 5762.905 kb on + strand, within Psyr_4856 at 5762.905 kb on + strand, within Psyr_4856 at 5762.906 kb on - strand, within Psyr_4856 at 5762.906 kb on - strand, within Psyr_4856 at 5762.906 kb on - strand, within Psyr_4856 at 5763.022 kb on + strand, within Psyr_4856 at 5763.023 kb on - strand, within Psyr_4856 at 5763.058 kb on - strand at 5763.423 kb on + strand, within Psyr_4857 at 5763.423 kb on + strand, within Psyr_4857 at 5763.424 kb on - strand, within Psyr_4857 at 5763.424 kb on - strand, within Psyr_4857 at 5763.424 kb on - strand, within Psyr_4857 at 5763.741 kb on + strand, within Psyr_4857 at 5763.759 kb on + strand, within Psyr_4857 at 5763.759 kb on + strand, within Psyr_4857 at 5763.759 kb on + strand, within Psyr_4857 at 5763.759 kb on + strand, within Psyr_4857 at 5763.759 kb on + strand, within Psyr_4857 at 5763.759 kb on + strand, within Psyr_4857 at 5763.760 kb on - strand, within Psyr_4857 at 5763.760 kb on - strand, within Psyr_4857 at 5763.809 kb on + strand, within Psyr_4857 at 5763.809 kb on + strand, within Psyr_4857 at 5763.809 kb on + strand, within Psyr_4857 at 5763.809 kb on + strand, within Psyr_4857 at 5763.809 kb on + strand, within Psyr_4857 at 5763.810 kb on - strand, within Psyr_4857 at 5763.810 kb on - strand, within Psyr_4857 at 5763.810 kb on - strand, within Psyr_4857 at 5763.810 kb on - strand, within Psyr_4857 at 5763.864 kb on - strand, within Psyr_4857 at 5763.897 kb on + strand, within Psyr_4857 at 5763.909 kb on + strand at 5763.910 kb on - strand at 5764.037 kb on + strand at 5764.043 kb on + strand at 5764.073 kb on + strand at 5764.073 kb on + strand at 5764.074 kb on - strand at 5764.083 kb on + strand at 5764.093 kb on + strand at 5764.094 kb on - strand at 5764.094 kb on - strand at 5764.094 kb on - strand at 5764.094 kb on - strand at 5764.094 kb on - strand at 5764.229 kb on - strand at 5764.245 kb on + strand at 5764.254 kb on + strand at 5764.254 kb on + strand at 5764.255 kb on - strand at 5764.255 kb on - strand at 5764.255 kb on - strand at 5764.290 kb on + strand at 5764.290 kb on + strand at 5764.290 kb on + strand at 5764.291 kb on - strand at 5764.291 kb on - strand at 5764.291 kb on - strand at 5764.331 kb on + strand at 5764.331 kb on + strand at 5764.332 kb on - strand at 5764.335 kb on + strand at 5764.335 kb on + strand at 5764.335 kb on + strand at 5764.335 kb on + strand at 5764.335 kb on + strand at 5764.335 kb on + strand at 5764.335 kb on + strand at 5764.336 kb on - strand at 5764.336 kb on - strand at 5764.336 kb on - strand at 5764.336 kb on - strand at 5764.336 kb on - strand at 5764.336 kb on - strand at 5764.336 kb on - strand at 5764.336 kb on - strand at 5764.339 kb on + strand at 5764.340 kb on - strand at 5764.340 kb on - strand at 5764.340 kb on - strand at 5764.472 kb on + strand at 5764.545 kb on + strand, within Psyr_4858 at 5764.545 kb on + strand, within Psyr_4858 at 5764.616 kb on + strand, within Psyr_4858 at 5764.616 kb on + strand, within Psyr_4858 at 5764.616 kb on + strand, within Psyr_4858 at 5764.616 kb on + strand, within Psyr_4858 at 5764.616 kb on + strand, within Psyr_4858 at 5764.616 kb on + strand, within Psyr_4858 at 5764.616 kb on + strand, within Psyr_4858 at 5764.616 kb on + strand, within Psyr_4858 at 5764.616 kb on + strand, within Psyr_4858 at 5764.616 kb on + strand, within Psyr_4858 at 5764.616 kb on + strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.617 kb on - strand, within Psyr_4858 at 5764.667 kb on + strand, within Psyr_4858 at 5764.667 kb on + strand, within Psyr_4858 at 5764.667 kb on + strand, within Psyr_4858 at 5764.667 kb on + strand, within Psyr_4858 at 5764.668 kb on - strand, within Psyr_4858 at 5764.688 kb on + strand, within Psyr_4858 at 5764.781 kb on + strand, within Psyr_4858 at 5764.832 kb on + strand, within Psyr_4858 at 5764.832 kb on + strand, within Psyr_4858 at 5764.832 kb on + strand, within Psyr_4858 at 5764.832 kb on + strand, within Psyr_4858 at 5764.832 kb on + strand, within Psyr_4858 at 5764.832 kb on + strand, within Psyr_4858 at 5764.832 kb on + strand, within Psyr_4858 at 5764.833 kb on - strand, within Psyr_4858 at 5764.833 kb on - strand, within Psyr_4858 at 5764.833 kb on - strand, within Psyr_4858 at 5764.833 kb on - strand, within Psyr_4858 at 5764.833 kb on - strand, within Psyr_4858 at 5764.859 kb on + strand, within Psyr_4858 at 5764.859 kb on + strand, within Psyr_4858 at 5764.859 kb on + strand, within Psyr_4858 at 5764.859 kb on + strand, within Psyr_4858 at 5764.860 kb on - strand, within Psyr_4858 at 5764.860 kb on - strand, within Psyr_4858
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Conessine 10 mM remove 5,762,118 + +0.2 5,762,118 + +0.1 5,762,118 + +0.0 5,762,118 + -0.5 5,762,118 + -1.7 5,762,130 + -1.2 5,762,130 + +0.7 5,762,130 + -1.0 5,762,130 + -1.9 5,762,131 - -0.1 5,762,131 - -0.3 5,762,131 - +1.3 5,762,131 - +0.6 5,762,131 - -0.4 5,762,131 - -1.2 5,762,131 - +2.0 5,762,200 - Psyr_4855 0.19 -1.9 5,762,226 + Psyr_4855 0.22 +0.6 5,762,661 + Psyr_4855 0.79 -3.1 5,762,661 + Psyr_4855 0.79 -1.2 5,762,661 + Psyr_4855 0.79 +0.5 5,762,661 + Psyr_4855 0.79 -0.1 5,762,661 + Psyr_4855 0.79 +0.9 5,762,661 + Psyr_4855 0.79 +1.9 5,762,661 + Psyr_4855 0.79 +1.0 5,762,661 + Psyr_4855 0.79 -0.3 5,762,661 + Psyr_4855 0.79 +0.5 5,762,662 - Psyr_4855 0.80 +2.2 5,762,662 - Psyr_4855 0.80 -0.2 5,762,662 - Psyr_4855 0.80 -0.2 5,762,662 - Psyr_4855 0.80 -0.1 5,762,662 - Psyr_4855 0.80 +0.1 5,762,736 + Psyr_4855 0.89 +0.5 5,762,736 + Psyr_4855 0.89 -0.1 5,762,740 - Psyr_4855 0.90 -2.1 5,762,815 - -1.4 5,762,815 - -1.0 5,762,867 + +0.9 5,762,867 + +0.1 5,762,867 + +0.5 5,762,867 + -2.1 5,762,867 + +0.3 5,762,868 - +1.3 5,762,905 + Psyr_4856 0.19 -0.3 5,762,905 + Psyr_4856 0.19 -0.1 5,762,905 + Psyr_4856 0.19 -1.4 5,762,906 - Psyr_4856 0.20 -0.6 5,762,906 - Psyr_4856 0.20 -0.9 5,762,906 - Psyr_4856 0.20 +0.8 5,763,022 + Psyr_4856 0.80 -0.2 5,763,023 - Psyr_4856 0.81 -1.4 5,763,058 - +0.5 5,763,423 + Psyr_4857 0.39 +0.0 5,763,423 + Psyr_4857 0.39 -2.7 5,763,424 - Psyr_4857 0.39 -0.4 5,763,424 - Psyr_4857 0.39 -1.0 5,763,424 - Psyr_4857 0.39 +0.2 5,763,741 + Psyr_4857 0.73 +0.5 5,763,759 + Psyr_4857 0.75 -1.5 5,763,759 + Psyr_4857 0.75 -1.4 5,763,759 + Psyr_4857 0.75 -0.5 5,763,759 + Psyr_4857 0.75 +0.5 5,763,759 + Psyr_4857 0.75 -0.4 5,763,759 + Psyr_4857 0.75 +0.0 5,763,760 - Psyr_4857 0.75 +0.6 5,763,760 - Psyr_4857 0.75 -0.1 5,763,809 + Psyr_4857 0.80 -2.5 5,763,809 + Psyr_4857 0.80 -0.6 5,763,809 + Psyr_4857 0.80 -1.8 5,763,809 + Psyr_4857 0.80 -1.2 5,763,809 + Psyr_4857 0.80 -1.1 5,763,810 - Psyr_4857 0.80 -1.2 5,763,810 - Psyr_4857 0.80 -0.2 5,763,810 - Psyr_4857 0.80 -0.1 5,763,810 - Psyr_4857 0.80 +0.7 5,763,864 - Psyr_4857 0.86 -0.3 5,763,897 + Psyr_4857 0.89 -0.5 5,763,909 + -0.3 5,763,910 - -2.2 5,764,037 + -0.6 5,764,043 + -0.4 5,764,073 + +0.9 5,764,073 + +1.0 5,764,074 - +1.7 5,764,083 + -0.3 5,764,093 + +1.1 5,764,094 - -1.1 5,764,094 - +0.7 5,764,094 - -0.8 5,764,094 - +0.5 5,764,094 - -0.1 5,764,229 - -0.6 5,764,245 + -0.2 5,764,254 + +0.5 5,764,254 + -1.5 5,764,255 - +0.0 5,764,255 - -0.6 5,764,255 - -1.0 5,764,290 + -2.9 5,764,290 + -1.1 5,764,290 + -0.3 5,764,291 - -1.0 5,764,291 - +0.2 5,764,291 - +0.6 5,764,331 + -1.1 5,764,331 + +0.2 5,764,332 - +0.2 5,764,335 + -1.4 5,764,335 + +0.7 5,764,335 + -0.3 5,764,335 + +1.5 5,764,335 + -0.5 5,764,335 + +1.2 5,764,335 + +0.7 5,764,336 - -0.0 5,764,336 - +0.7 5,764,336 - +2.5 5,764,336 - -0.5 5,764,336 - +0.7 5,764,336 - -1.5 5,764,336 - -0.4 5,764,336 - +1.5 5,764,339 + -2.1 5,764,340 - +0.1 5,764,340 - -0.9 5,764,340 - +0.0 5,764,472 + -0.0 5,764,545 + Psyr_4858 0.12 +1.3 5,764,545 + Psyr_4858 0.12 -0.6 5,764,616 + Psyr_4858 0.15 +1.5 5,764,616 + Psyr_4858 0.15 -0.4 5,764,616 + Psyr_4858 0.15 +0.2 5,764,616 + Psyr_4858 0.15 +1.2 5,764,616 + Psyr_4858 0.15 -0.2 5,764,616 + Psyr_4858 0.15 +0.2 5,764,616 + Psyr_4858 0.15 +0.4 5,764,616 + Psyr_4858 0.15 +1.7 5,764,616 + Psyr_4858 0.15 -0.4 5,764,616 + Psyr_4858 0.15 -0.6 5,764,616 + Psyr_4858 0.15 +1.8 5,764,617 - Psyr_4858 0.15 -0.9 5,764,617 - Psyr_4858 0.15 -0.6 5,764,617 - Psyr_4858 0.15 +0.9 5,764,617 - Psyr_4858 0.15 +0.5 5,764,617 - Psyr_4858 0.15 +1.6 5,764,617 - Psyr_4858 0.15 +0.7 5,764,617 - Psyr_4858 0.15 -1.9 5,764,617 - Psyr_4858 0.15 +0.8 5,764,617 - Psyr_4858 0.15 -0.8 5,764,617 - Psyr_4858 0.15 -0.1 5,764,617 - Psyr_4858 0.15 -0.4 5,764,617 - Psyr_4858 0.15 -0.5 5,764,617 - Psyr_4858 0.15 -1.7 5,764,617 - Psyr_4858 0.15 -0.1 5,764,617 - Psyr_4858 0.15 +0.3 5,764,667 + Psyr_4858 0.17 -1.3 5,764,667 + Psyr_4858 0.17 +1.9 5,764,667 + Psyr_4858 0.17 -2.2 5,764,667 + Psyr_4858 0.17 +1.2 5,764,668 - Psyr_4858 0.17 +0.7 5,764,688 + Psyr_4858 0.18 -0.6 5,764,781 + Psyr_4858 0.21 +1.3 5,764,832 + Psyr_4858 0.24 -0.6 5,764,832 + Psyr_4858 0.24 -2.6 5,764,832 + Psyr_4858 0.24 -0.1 5,764,832 + Psyr_4858 0.24 -1.1 5,764,832 + Psyr_4858 0.24 -0.3 5,764,832 + Psyr_4858 0.24 -0.7 5,764,832 + Psyr_4858 0.24 -0.9 5,764,833 - Psyr_4858 0.24 -1.4 5,764,833 - Psyr_4858 0.24 -1.7 5,764,833 - Psyr_4858 0.24 -0.5 5,764,833 - Psyr_4858 0.24 +1.5 5,764,833 - Psyr_4858 0.24 -0.0 5,764,859 + Psyr_4858 0.25 +0.3 5,764,859 + Psyr_4858 0.25 +0.9 5,764,859 + Psyr_4858 0.25 -0.1 5,764,859 + Psyr_4858 0.25 +0.3 5,764,860 - Psyr_4858 0.25 +0.2 5,764,860 - Psyr_4858 0.25 -0.6
Or see this region's nucleotide sequence