Experiment: KB with Conessine 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4511 and Psyr_4512 overlap by 45 nucleotides Psyr_4512 and Psyr_4513 are separated by 69 nucleotides Psyr_4513 and Psyr_4514 are separated by 702 nucleotides
Psyr_4511: Psyr_4511 - hypothetical protein, at 5,374,960 to 5,376,048
_4511
Psyr_4512: Psyr_4512 - putative phage-related protein, at 5,376,004 to 5,376,594
_4512
Psyr_4513: Psyr_4513 - hypothetical protein, at 5,376,664 to 5,377,077
_4513
Psyr_4514: Psyr_4514 - conserved hypothetical protein, at 5,377,780 to 5,378,865
_4514
Position (kb) 5376
5377
5378 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 5375.713 kb on + strand, within Psyr_4511 at 5375.724 kb on + strand, within Psyr_4511 at 5375.817 kb on + strand, within Psyr_4511 at 5375.819 kb on + strand, within Psyr_4511 at 5375.861 kb on - strand, within Psyr_4511 at 5375.921 kb on - strand, within Psyr_4511 at 5375.921 kb on - strand, within Psyr_4511 at 5375.932 kb on + strand, within Psyr_4511 at 5375.932 kb on + strand, within Psyr_4511 at 5375.932 kb on + strand, within Psyr_4511 at 5375.932 kb on + strand, within Psyr_4511 at 5375.932 kb on + strand, within Psyr_4511 at 5375.932 kb on + strand, within Psyr_4511 at 5375.951 kb on - strand at 5376.024 kb on + strand at 5376.024 kb on + strand at 5376.024 kb on + strand at 5376.024 kb on + strand at 5376.025 kb on - strand at 5376.025 kb on - strand at 5376.025 kb on - strand at 5376.180 kb on + strand, within Psyr_4512 at 5376.226 kb on - strand, within Psyr_4512 at 5376.260 kb on + strand, within Psyr_4512 at 5376.261 kb on - strand, within Psyr_4512 at 5376.261 kb on - strand, within Psyr_4512 at 5376.261 kb on - strand, within Psyr_4512 at 5376.261 kb on - strand, within Psyr_4512 at 5376.261 kb on - strand, within Psyr_4512 at 5376.261 kb on - strand, within Psyr_4512 at 5376.296 kb on - strand, within Psyr_4512 at 5376.328 kb on - strand, within Psyr_4512 at 5376.328 kb on - strand, within Psyr_4512 at 5376.342 kb on + strand, within Psyr_4512 at 5376.343 kb on - strand, within Psyr_4512 at 5376.343 kb on - strand, within Psyr_4512 at 5376.357 kb on + strand, within Psyr_4512 at 5376.366 kb on + strand, within Psyr_4512 at 5376.366 kb on + strand, within Psyr_4512 at 5376.389 kb on + strand, within Psyr_4512 at 5376.446 kb on + strand, within Psyr_4512 at 5376.475 kb on + strand, within Psyr_4512 at 5376.475 kb on + strand, within Psyr_4512 at 5376.475 kb on + strand, within Psyr_4512 at 5376.475 kb on + strand, within Psyr_4512 at 5376.475 kb on + strand, within Psyr_4512 at 5376.475 kb on + strand, within Psyr_4512 at 5376.475 kb on + strand, within Psyr_4512 at 5376.476 kb on - strand, within Psyr_4512 at 5376.476 kb on - strand, within Psyr_4512 at 5376.583 kb on - strand at 5376.583 kb on - strand at 5376.636 kb on + strand at 5376.687 kb on + strand at 5376.687 kb on + strand at 5376.719 kb on + strand, within Psyr_4513 at 5376.719 kb on + strand, within Psyr_4513 at 5376.731 kb on + strand, within Psyr_4513 at 5376.731 kb on + strand, within Psyr_4513 at 5376.731 kb on + strand, within Psyr_4513 at 5376.732 kb on - strand, within Psyr_4513 at 5376.732 kb on - strand, within Psyr_4513 at 5376.732 kb on - strand, within Psyr_4513 at 5376.732 kb on - strand, within Psyr_4513 at 5376.732 kb on - strand, within Psyr_4513 at 5376.732 kb on - strand, within Psyr_4513 at 5376.750 kb on + strand at 5376.750 kb on + strand, within Psyr_4513 at 5376.750 kb on + strand, within Psyr_4513 at 5376.757 kb on - strand, within Psyr_4513 at 5376.757 kb on - strand, within Psyr_4513 at 5376.757 kb on - strand, within Psyr_4513 at 5376.757 kb on - strand, within Psyr_4513 at 5376.757 kb on - strand, within Psyr_4513 at 5376.759 kb on + strand, within Psyr_4513 at 5376.759 kb on + strand, within Psyr_4513 at 5376.759 kb on + strand, within Psyr_4513 at 5376.759 kb on + strand, within Psyr_4513 at 5376.759 kb on + strand, within Psyr_4513 at 5376.760 kb on - strand, within Psyr_4513 at 5376.760 kb on - strand, within Psyr_4513 at 5376.760 kb on - strand, within Psyr_4513 at 5376.760 kb on - strand, within Psyr_4513 at 5376.953 kb on + strand, within Psyr_4513 at 5376.953 kb on + strand, within Psyr_4513 at 5376.954 kb on - strand, within Psyr_4513 at 5376.954 kb on - strand, within Psyr_4513 at 5376.954 kb on - strand, within Psyr_4513 at 5376.954 kb on - strand, within Psyr_4513 at 5376.954 kb on - strand, within Psyr_4513 at 5376.954 kb on - strand, within Psyr_4513 at 5377.064 kb on + strand at 5377.064 kb on + strand at 5377.064 kb on + strand at 5377.064 kb on + strand at 5377.065 kb on - strand at 5377.065 kb on - strand at 5377.065 kb on - strand at 5377.105 kb on + strand at 5377.105 kb on + strand at 5377.125 kb on + strand at 5377.126 kb on - strand at 5377.223 kb on + strand at 5377.223 kb on + strand at 5377.223 kb on + strand at 5377.223 kb on + strand at 5377.224 kb on - strand at 5377.224 kb on - strand at 5377.224 kb on - strand at 5377.224 kb on - strand at 5377.224 kb on - strand at 5377.224 kb on - strand at 5377.224 kb on - strand at 5377.226 kb on + strand at 5377.226 kb on + strand at 5377.226 kb on + strand at 5377.227 kb on - strand at 5377.227 kb on - strand at 5377.227 kb on - strand at 5377.227 kb on - strand at 5377.285 kb on + strand at 5377.285 kb on + strand at 5377.286 kb on - strand at 5377.286 kb on - strand at 5377.286 kb on - strand at 5377.286 kb on - strand at 5377.286 kb on - strand at 5377.453 kb on + strand at 5377.490 kb on + strand at 5377.491 kb on - strand at 5377.491 kb on - strand at 5377.502 kb on + strand at 5377.502 kb on + strand at 5377.503 kb on - strand at 5377.527 kb on + strand at 5377.527 kb on + strand at 5377.531 kb on + strand at 5377.531 kb on + strand at 5377.531 kb on + strand at 5377.532 kb on - strand at 5377.532 kb on - strand at 5377.536 kb on - strand at 5377.540 kb on - strand at 5377.547 kb on + strand at 5377.548 kb on - strand at 5377.563 kb on + strand at 5377.563 kb on + strand at 5377.563 kb on + strand at 5377.564 kb on - strand at 5377.564 kb on - strand at 5377.564 kb on - strand at 5377.564 kb on - strand at 5377.564 kb on - strand at 5377.572 kb on + strand at 5377.580 kb on + strand at 5377.580 kb on + strand at 5377.625 kb on + strand at 5377.626 kb on - strand at 5377.626 kb on - strand at 5377.626 kb on - strand at 5377.626 kb on - strand at 5377.626 kb on - strand at 5377.626 kb on - strand at 5377.653 kb on + strand at 5377.653 kb on + strand at 5377.654 kb on - strand at 5377.654 kb on - strand at 5377.749 kb on - strand at 5377.749 kb on - strand at 5377.751 kb on + strand at 5377.752 kb on - strand at 5377.760 kb on - strand at 5377.782 kb on - strand at 5377.782 kb on - strand at 5377.786 kb on - strand at 5377.807 kb on + strand at 5377.922 kb on + strand, within Psyr_4514 at 5377.922 kb on + strand, within Psyr_4514 at 5377.923 kb on - strand, within Psyr_4514 at 5377.923 kb on - strand, within Psyr_4514 at 5377.935 kb on - strand, within Psyr_4514 at 5377.972 kb on + strand, within Psyr_4514 at 5377.973 kb on - strand, within Psyr_4514 at 5377.990 kb on - strand, within Psyr_4514 at 5378.013 kb on - strand, within Psyr_4514 at 5378.016 kb on + strand, within Psyr_4514
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Conessine 10 mM remove 5,375,713 + Psyr_4511 0.69 +0.4 5,375,724 + Psyr_4511 0.70 -1.6 5,375,817 + Psyr_4511 0.79 +0.2 5,375,819 + Psyr_4511 0.79 -2.5 5,375,861 - Psyr_4511 0.83 -1.9 5,375,921 - Psyr_4511 0.88 -1.5 5,375,921 - Psyr_4511 0.88 +1.5 5,375,932 + Psyr_4511 0.89 +0.2 5,375,932 + Psyr_4511 0.89 +1.5 5,375,932 + Psyr_4511 0.89 +0.2 5,375,932 + Psyr_4511 0.89 -2.8 5,375,932 + Psyr_4511 0.89 -0.4 5,375,932 + Psyr_4511 0.89 +0.3 5,375,951 - +0.3 5,376,024 + -1.3 5,376,024 + -2.7 5,376,024 + +0.2 5,376,024 + -1.6 5,376,025 - -0.4 5,376,025 - -1.5 5,376,025 - -0.7 5,376,180 + Psyr_4512 0.30 -3.1 5,376,226 - Psyr_4512 0.38 -0.4 5,376,260 + Psyr_4512 0.43 -1.1 5,376,261 - Psyr_4512 0.43 -1.8 5,376,261 - Psyr_4512 0.43 -0.1 5,376,261 - Psyr_4512 0.43 -0.3 5,376,261 - Psyr_4512 0.43 -0.3 5,376,261 - Psyr_4512 0.43 -2.4 5,376,261 - Psyr_4512 0.43 -1.3 5,376,296 - Psyr_4512 0.49 -0.0 5,376,328 - Psyr_4512 0.55 -2.6 5,376,328 - Psyr_4512 0.55 -2.1 5,376,342 + Psyr_4512 0.57 -3.9 5,376,343 - Psyr_4512 0.57 -1.4 5,376,343 - Psyr_4512 0.57 -2.4 5,376,357 + Psyr_4512 0.60 -2.8 5,376,366 + Psyr_4512 0.61 -2.6 5,376,366 + Psyr_4512 0.61 -1.8 5,376,389 + Psyr_4512 0.65 +2.5 5,376,446 + Psyr_4512 0.75 -1.8 5,376,475 + Psyr_4512 0.80 -1.3 5,376,475 + Psyr_4512 0.80 -2.4 5,376,475 + Psyr_4512 0.80 -1.9 5,376,475 + Psyr_4512 0.80 +0.3 5,376,475 + Psyr_4512 0.80 +0.1 5,376,475 + Psyr_4512 0.80 +0.3 5,376,475 + Psyr_4512 0.80 -0.7 5,376,476 - Psyr_4512 0.80 -1.8 5,376,476 - Psyr_4512 0.80 -1.3 5,376,583 - -0.4 5,376,583 - -0.0 5,376,636 + -0.2 5,376,687 + +0.0 5,376,687 + +0.6 5,376,719 + Psyr_4513 0.13 +1.6 5,376,719 + Psyr_4513 0.13 +1.3 5,376,731 + Psyr_4513 0.16 +0.1 5,376,731 + Psyr_4513 0.16 +0.3 5,376,731 + Psyr_4513 0.16 -1.8 5,376,732 - Psyr_4513 0.16 +0.8 5,376,732 - Psyr_4513 0.16 +0.8 5,376,732 - Psyr_4513 0.16 -0.6 5,376,732 - Psyr_4513 0.16 +0.7 5,376,732 - Psyr_4513 0.16 -0.1 5,376,732 - Psyr_4513 0.16 +0.6 5,376,750 + -2.1 5,376,750 + Psyr_4513 0.21 +0.3 5,376,750 + Psyr_4513 0.21 -1.0 5,376,757 - Psyr_4513 0.22 +0.1 5,376,757 - Psyr_4513 0.22 -0.1 5,376,757 - Psyr_4513 0.22 +0.2 5,376,757 - Psyr_4513 0.22 +0.4 5,376,757 - Psyr_4513 0.22 -0.4 5,376,759 + Psyr_4513 0.23 +1.3 5,376,759 + Psyr_4513 0.23 +1.9 5,376,759 + Psyr_4513 0.23 -0.2 5,376,759 + Psyr_4513 0.23 -0.9 5,376,759 + Psyr_4513 0.23 -0.1 5,376,760 - Psyr_4513 0.23 +0.7 5,376,760 - Psyr_4513 0.23 -0.3 5,376,760 - Psyr_4513 0.23 -0.2 5,376,760 - Psyr_4513 0.23 +0.5 5,376,953 + Psyr_4513 0.70 +2.9 5,376,953 + Psyr_4513 0.70 -1.3 5,376,954 - Psyr_4513 0.70 -0.7 5,376,954 - Psyr_4513 0.70 +1.2 5,376,954 - Psyr_4513 0.70 +1.0 5,376,954 - Psyr_4513 0.70 +0.3 5,376,954 - Psyr_4513 0.70 +1.1 5,376,954 - Psyr_4513 0.70 -1.0 5,377,064 + -0.3 5,377,064 + -0.5 5,377,064 + +0.9 5,377,064 + -1.3 5,377,065 - +2.2 5,377,065 - +1.5 5,377,065 - -3.1 5,377,105 + -1.0 5,377,105 + -0.0 5,377,125 + +2.5 5,377,126 - -0.4 5,377,223 + +0.8 5,377,223 + +0.6 5,377,223 + +2.3 5,377,223 + +2.2 5,377,224 - +0.0 5,377,224 - +0.3 5,377,224 - +0.2 5,377,224 - -1.5 5,377,224 - +0.3 5,377,224 - +0.1 5,377,224 - +0.1 5,377,226 + -1.5 5,377,226 + +0.0 5,377,226 + +0.1 5,377,227 - +0.3 5,377,227 - -2.2 5,377,227 - +0.2 5,377,227 - +2.7 5,377,285 + +0.7 5,377,285 + +1.7 5,377,286 - -1.2 5,377,286 - +0.1 5,377,286 - +3.1 5,377,286 - +0.7 5,377,286 - -1.1 5,377,453 + +0.7 5,377,490 + -0.7 5,377,491 - +0.9 5,377,491 - -0.0 5,377,502 + -0.0 5,377,502 + -0.2 5,377,503 - -0.3 5,377,527 + -0.0 5,377,527 + -0.1 5,377,531 + -0.3 5,377,531 + -0.9 5,377,531 + +0.7 5,377,532 - +0.2 5,377,532 - -0.8 5,377,536 - -1.3 5,377,540 - -0.5 5,377,547 + -0.0 5,377,548 - -0.3 5,377,563 + +0.3 5,377,563 + -1.6 5,377,563 + -0.9 5,377,564 - -2.1 5,377,564 - +1.3 5,377,564 - -1.0 5,377,564 - +0.3 5,377,564 - -0.6 5,377,572 + -0.3 5,377,580 + -0.2 5,377,580 + +3.5 5,377,625 + -0.4 5,377,626 - +0.3 5,377,626 - -0.0 5,377,626 - +1.1 5,377,626 - +0.1 5,377,626 - +1.8 5,377,626 - -1.8 5,377,653 + +0.7 5,377,653 + +0.9 5,377,654 - -1.3 5,377,654 - -3.1 5,377,749 - -0.7 5,377,749 - -1.1 5,377,751 + +1.0 5,377,752 - -0.7 5,377,760 - +1.3 5,377,782 - +0.5 5,377,782 - +0.4 5,377,786 - +0.3 5,377,807 + -0.5 5,377,922 + Psyr_4514 0.13 +1.8 5,377,922 + Psyr_4514 0.13 +1.8 5,377,923 - Psyr_4514 0.13 +0.3 5,377,923 - Psyr_4514 0.13 +1.6 5,377,935 - Psyr_4514 0.14 -0.0 5,377,972 + Psyr_4514 0.18 +0.5 5,377,973 - Psyr_4514 0.18 -2.8 5,377,990 - Psyr_4514 0.19 -1.1 5,378,013 - Psyr_4514 0.21 +0.1 5,378,016 + Psyr_4514 0.22 -0.4
Or see this region's nucleotide sequence