Experiment: KB with Conessine 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_4359 and Psyr_4360 overlap by 1 nucleotides Psyr_4360 and Psyr_4361 are separated by 90 nucleotides Psyr_4361 and Psyr_4362 are separated by 214 nucleotides
Psyr_4359: Psyr_4359 - Lipoate-protein ligase B, at 5,212,943 to 5,213,599
_4359
Psyr_4360: Psyr_4360 - Protein of unknown function DUF493, at 5,213,599 to 5,213,874
_4360
Psyr_4361: Psyr_4361 - penicillin-binding protein 6, Serine peptidase, MEROPS family S11, at 5,213,965 to 5,215,152
_4361
Psyr_4362: Psyr_4362 - Rare lipoprotein A, at 5,215,367 to 5,216,395
_4362
Position (kb) 5213
5214
5215
5216 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5213.881 kb on - strand at 5213.982 kb on - strand at 5214.282 kb on - strand, within Psyr_4361 at 5214.315 kb on - strand, within Psyr_4361 at 5214.401 kb on - strand, within Psyr_4361 at 5214.401 kb on - strand, within Psyr_4361 at 5214.536 kb on + strand, within Psyr_4361 at 5214.537 kb on - strand, within Psyr_4361 at 5214.546 kb on - strand, within Psyr_4361 at 5214.912 kb on - strand, within Psyr_4361 at 5214.912 kb on - strand, within Psyr_4361 at 5215.144 kb on - strand at 5215.278 kb on - strand at 5215.278 kb on - strand at 5215.369 kb on - strand at 5215.369 kb on - strand at 5215.369 kb on - strand at 5215.369 kb on - strand at 5215.369 kb on - strand at 5215.386 kb on - strand at 5215.687 kb on - strand, within Psyr_4362 at 5215.687 kb on - strand, within Psyr_4362 at 5215.900 kb on - strand, within Psyr_4362 at 5215.969 kb on - strand, within Psyr_4362 at 5216.020 kb on - strand, within Psyr_4362 at 5216.020 kb on - strand at 5216.020 kb on - strand, within Psyr_4362 at 5216.020 kb on - strand, within Psyr_4362 at 5216.020 kb on - strand, within Psyr_4362 at 5216.020 kb on - strand, within Psyr_4362 at 5216.092 kb on - strand, within Psyr_4362
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Conessine 10 mM remove 5,213,881 - +3.3 5,213,982 - +1.5 5,214,282 - Psyr_4361 0.27 +2.9 5,214,315 - Psyr_4361 0.29 -1.0 5,214,401 - Psyr_4361 0.37 -0.5 5,214,401 - Psyr_4361 0.37 -0.3 5,214,536 + Psyr_4361 0.48 -1.9 5,214,537 - Psyr_4361 0.48 +0.3 5,214,546 - Psyr_4361 0.49 -1.0 5,214,912 - Psyr_4361 0.80 -1.7 5,214,912 - Psyr_4361 0.80 -1.6 5,215,144 - +0.3 5,215,278 - +1.5 5,215,278 - -0.7 5,215,369 - +1.1 5,215,369 - -0.9 5,215,369 - -0.7 5,215,369 - +3.5 5,215,369 - -0.8 5,215,386 - -1.3 5,215,687 - Psyr_4362 0.31 -3.5 5,215,687 - Psyr_4362 0.31 +0.3 5,215,900 - Psyr_4362 0.52 -2.9 5,215,969 - Psyr_4362 0.59 -1.0 5,216,020 - Psyr_4362 0.63 -1.5 5,216,020 - -1.7 5,216,020 - Psyr_4362 0.63 -0.7 5,216,020 - Psyr_4362 0.63 -1.9 5,216,020 - Psyr_4362 0.63 +0.9 5,216,020 - Psyr_4362 0.63 -1.3 5,216,092 - Psyr_4362 0.70 -3.2
Or see this region's nucleotide sequence