Experiment: KB with Conessine 10 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3726 and Psyr_3727 are separated by 52 nucleotides Psyr_3727 and Psyr_3728 are separated by 462 nucleotides Psyr_3728 and Psyr_3729 are separated by 82 nucleotides
Psyr_3726: Psyr_3726 - conserved hypothetical protein, at 4,435,760 to 4,436,335
_3726
Psyr_3727: Psyr_3727 - conserved hypothetical protein, at 4,436,388 to 4,436,639
_3727
Psyr_3728: Psyr_3728 - hypothetical protein, at 4,437,102 to 4,437,470
_3728
Psyr_3729: Psyr_3729 - hypothetical protein, at 4,437,553 to 4,437,909
_3729
Position (kb) 4436
4437 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 4435.415 kb on + strand at 4435.415 kb on + strand at 4435.415 kb on + strand at 4435.415 kb on + strand at 4435.415 kb on + strand at 4435.416 kb on - strand at 4435.416 kb on - strand at 4435.419 kb on + strand at 4435.420 kb on - strand at 4435.464 kb on + strand at 4435.583 kb on + strand at 4435.583 kb on + strand at 4435.583 kb on + strand at 4435.584 kb on - strand at 4435.613 kb on + strand at 4435.613 kb on + strand at 4435.613 kb on + strand at 4435.613 kb on + strand at 4435.613 kb on + strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.614 kb on - strand at 4435.655 kb on + strand at 4435.715 kb on + strand at 4435.715 kb on + strand at 4435.715 kb on + strand at 4435.716 kb on - strand at 4435.716 kb on - strand at 4435.716 kb on - strand at 4435.716 kb on - strand at 4435.716 kb on - strand at 4435.745 kb on + strand at 4435.745 kb on + strand at 4435.745 kb on + strand at 4435.745 kb on + strand at 4435.745 kb on + strand at 4435.746 kb on - strand at 4435.746 kb on - strand at 4435.746 kb on - strand at 4435.746 kb on - strand at 4435.746 kb on - strand at 4435.746 kb on - strand at 4435.746 kb on - strand at 4435.749 kb on + strand at 4435.749 kb on + strand at 4435.749 kb on + strand at 4435.750 kb on - strand at 4435.750 kb on - strand at 4435.750 kb on - strand at 4435.750 kb on - strand at 4435.764 kb on + strand at 4435.764 kb on + strand at 4435.773 kb on + strand at 4436.033 kb on + strand, within Psyr_3726 at 4436.055 kb on - strand, within Psyr_3726 at 4436.055 kb on - strand, within Psyr_3726 at 4436.055 kb on - strand, within Psyr_3726 at 4436.184 kb on + strand, within Psyr_3726 at 4436.188 kb on + strand, within Psyr_3726 at 4436.188 kb on + strand, within Psyr_3726 at 4436.188 kb on + strand, within Psyr_3726 at 4436.188 kb on + strand, within Psyr_3726 at 4436.188 kb on + strand, within Psyr_3726 at 4436.188 kb on + strand, within Psyr_3726 at 4436.188 kb on + strand, within Psyr_3726 at 4436.188 kb on + strand, within Psyr_3726 at 4436.188 kb on + strand, within Psyr_3726 at 4436.188 kb on + strand, within Psyr_3726 at 4436.188 kb on + strand, within Psyr_3726 at 4436.188 kb on + strand, within Psyr_3726 at 4436.188 kb on + strand, within Psyr_3726 at 4436.188 kb on + strand, within Psyr_3726 at 4436.189 kb on - strand, within Psyr_3726 at 4436.189 kb on - strand, within Psyr_3726 at 4436.189 kb on - strand, within Psyr_3726 at 4436.189 kb on - strand, within Psyr_3726 at 4436.189 kb on - strand, within Psyr_3726 at 4436.189 kb on - strand, within Psyr_3726 at 4436.189 kb on - strand, within Psyr_3726 at 4436.189 kb on - strand, within Psyr_3726 at 4436.189 kb on - strand, within Psyr_3726 at 4436.189 kb on - strand, within Psyr_3726 at 4436.189 kb on - strand, within Psyr_3726 at 4436.189 kb on - strand, within Psyr_3726 at 4436.189 kb on - strand, within Psyr_3726 at 4436.281 kb on + strand at 4436.281 kb on + strand at 4436.281 kb on + strand at 4436.281 kb on + strand at 4436.282 kb on - strand at 4436.282 kb on - strand at 4436.313 kb on + strand at 4436.314 kb on - strand at 4436.446 kb on + strand, within Psyr_3727 at 4436.447 kb on - strand, within Psyr_3727 at 4436.447 kb on - strand, within Psyr_3727 at 4436.480 kb on - strand, within Psyr_3727 at 4436.480 kb on - strand, within Psyr_3727 at 4436.524 kb on + strand, within Psyr_3727 at 4436.525 kb on - strand, within Psyr_3727 at 4436.598 kb on + strand, within Psyr_3727 at 4436.598 kb on + strand, within Psyr_3727 at 4436.599 kb on - strand, within Psyr_3727 at 4436.599 kb on - strand, within Psyr_3727 at 4436.619 kb on + strand at 4436.619 kb on + strand at 4436.620 kb on - strand at 4436.682 kb on - strand at 4436.820 kb on + strand at 4436.838 kb on - strand at 4436.838 kb on - strand at 4436.838 kb on - strand at 4436.840 kb on - strand at 4436.871 kb on - strand at 4436.922 kb on + strand at 4436.922 kb on + strand at 4436.923 kb on - strand at 4436.928 kb on + strand at 4436.929 kb on - strand at 4436.929 kb on - strand at 4436.948 kb on - strand at 4436.977 kb on + strand at 4436.977 kb on + strand at 4436.977 kb on + strand at 4436.977 kb on + strand at 4436.977 kb on + strand at 4436.978 kb on - strand at 4436.978 kb on - strand at 4436.978 kb on - strand at 4436.978 kb on - strand at 4436.978 kb on - strand at 4436.978 kb on - strand at 4436.978 kb on - strand at 4436.981 kb on + strand at 4436.981 kb on + strand at 4436.981 kb on + strand at 4436.982 kb on - strand at 4436.982 kb on - strand at 4436.982 kb on - strand at 4437.097 kb on - strand at 4437.143 kb on + strand, within Psyr_3728 at 4437.143 kb on + strand, within Psyr_3728 at 4437.171 kb on + strand, within Psyr_3728 at 4437.171 kb on + strand, within Psyr_3728 at 4437.171 kb on + strand, within Psyr_3728 at 4437.269 kb on + strand, within Psyr_3728 at 4437.269 kb on + strand, within Psyr_3728 at 4437.270 kb on - strand, within Psyr_3728 at 4437.273 kb on + strand, within Psyr_3728 at 4437.273 kb on + strand, within Psyr_3728 at 4437.274 kb on - strand, within Psyr_3728 at 4437.274 kb on - strand, within Psyr_3728 at 4437.276 kb on + strand, within Psyr_3728 at 4437.276 kb on + strand, within Psyr_3728 at 4437.277 kb on - strand, within Psyr_3728 at 4437.277 kb on - strand, within Psyr_3728 at 4437.280 kb on + strand, within Psyr_3728 at 4437.280 kb on + strand, within Psyr_3728 at 4437.281 kb on - strand, within Psyr_3728 at 4437.365 kb on + strand, within Psyr_3728 at 4437.365 kb on + strand, within Psyr_3728 at 4437.503 kb on + strand at 4437.540 kb on + strand at 4437.540 kb on + strand at 4437.541 kb on - strand at 4437.554 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Conessine 10 mM remove 4,435,415 + -1.7 4,435,415 + -0.8 4,435,415 + -1.4 4,435,415 + -1.1 4,435,415 + -0.2 4,435,416 - +0.1 4,435,416 - -0.6 4,435,419 + -1.1 4,435,420 - -0.8 4,435,464 + +0.1 4,435,583 + +0.3 4,435,583 + -0.3 4,435,583 + +0.2 4,435,584 - -0.0 4,435,613 + +1.0 4,435,613 + +1.1 4,435,613 + -1.1 4,435,613 + +2.1 4,435,613 + +2.1 4,435,614 - -0.3 4,435,614 - +0.4 4,435,614 - -2.4 4,435,614 - -3.4 4,435,614 - +4.0 4,435,614 - -1.0 4,435,614 - -2.3 4,435,614 - -0.8 4,435,614 - -2.9 4,435,614 - -1.6 4,435,614 - +1.7 4,435,614 - +0.2 4,435,614 - +0.1 4,435,614 - +0.1 4,435,614 - -1.3 4,435,614 - -0.3 4,435,655 + -0.0 4,435,715 + +0.1 4,435,715 + -1.3 4,435,715 + +0.4 4,435,716 - -0.4 4,435,716 - -0.6 4,435,716 - -0.4 4,435,716 - -1.7 4,435,716 - -1.2 4,435,745 + +3.1 4,435,745 + -0.5 4,435,745 + -0.6 4,435,745 + +0.1 4,435,745 + -1.2 4,435,746 - -2.4 4,435,746 - +0.1 4,435,746 - +0.1 4,435,746 - +1.3 4,435,746 - -0.0 4,435,746 - +0.7 4,435,746 - -0.9 4,435,749 + +0.4 4,435,749 + +0.0 4,435,749 + -1.1 4,435,750 - +2.4 4,435,750 - +1.7 4,435,750 - +0.9 4,435,750 - -0.7 4,435,764 + +0.8 4,435,764 + -1.3 4,435,773 + +0.1 4,436,033 + Psyr_3726 0.47 -0.4 4,436,055 - Psyr_3726 0.51 -1.8 4,436,055 - Psyr_3726 0.51 -0.4 4,436,055 - Psyr_3726 0.51 -0.8 4,436,184 + Psyr_3726 0.74 -1.8 4,436,188 + Psyr_3726 0.74 -0.1 4,436,188 + Psyr_3726 0.74 +0.2 4,436,188 + Psyr_3726 0.74 -3.0 4,436,188 + Psyr_3726 0.74 -2.0 4,436,188 + Psyr_3726 0.74 -0.8 4,436,188 + Psyr_3726 0.74 +1.8 4,436,188 + Psyr_3726 0.74 -0.9 4,436,188 + Psyr_3726 0.74 -0.9 4,436,188 + Psyr_3726 0.74 +1.0 4,436,188 + Psyr_3726 0.74 +0.1 4,436,188 + Psyr_3726 0.74 -1.4 4,436,188 + Psyr_3726 0.74 +0.4 4,436,188 + Psyr_3726 0.74 +0.1 4,436,188 + Psyr_3726 0.74 +0.7 4,436,189 - Psyr_3726 0.74 -2.0 4,436,189 - Psyr_3726 0.74 -0.7 4,436,189 - Psyr_3726 0.74 +0.7 4,436,189 - Psyr_3726 0.74 -0.7 4,436,189 - Psyr_3726 0.74 -0.9 4,436,189 - Psyr_3726 0.74 -1.7 4,436,189 - Psyr_3726 0.74 -1.1 4,436,189 - Psyr_3726 0.74 -0.6 4,436,189 - Psyr_3726 0.74 -0.1 4,436,189 - Psyr_3726 0.74 -1.0 4,436,189 - Psyr_3726 0.74 +0.7 4,436,189 - Psyr_3726 0.74 +0.1 4,436,189 - Psyr_3726 0.74 -0.2 4,436,281 + +1.6 4,436,281 + -1.1 4,436,281 + -1.3 4,436,281 + -1.9 4,436,282 - -1.9 4,436,282 - +0.3 4,436,313 + -0.9 4,436,314 - -3.4 4,436,446 + Psyr_3727 0.23 -1.4 4,436,447 - Psyr_3727 0.23 -2.9 4,436,447 - Psyr_3727 0.23 -1.6 4,436,480 - Psyr_3727 0.37 -0.5 4,436,480 - Psyr_3727 0.37 -0.4 4,436,524 + Psyr_3727 0.54 -0.2 4,436,525 - Psyr_3727 0.54 +3.1 4,436,598 + Psyr_3727 0.83 +0.5 4,436,598 + Psyr_3727 0.83 -0.2 4,436,599 - Psyr_3727 0.84 -1.6 4,436,599 - Psyr_3727 0.84 -1.4 4,436,619 + -1.2 4,436,619 + -0.5 4,436,620 - -1.7 4,436,682 - -0.3 4,436,820 + -3.2 4,436,838 - +1.3 4,436,838 - -3.6 4,436,838 - -0.9 4,436,840 - -1.0 4,436,871 - -0.0 4,436,922 + -0.4 4,436,922 + +0.1 4,436,923 - -1.4 4,436,928 + -0.4 4,436,929 - +0.7 4,436,929 - +2.7 4,436,948 - -0.2 4,436,977 + -0.5 4,436,977 + +1.1 4,436,977 + -1.3 4,436,977 + -1.5 4,436,977 + -1.5 4,436,978 - +1.3 4,436,978 - +0.5 4,436,978 - -1.1 4,436,978 - +0.5 4,436,978 - +0.6 4,436,978 - -3.1 4,436,978 - -1.0 4,436,981 + +4.0 4,436,981 + -1.0 4,436,981 + -0.4 4,436,982 - +0.0 4,436,982 - -1.4 4,436,982 - +0.3 4,437,097 - +1.1 4,437,143 + Psyr_3728 0.11 -0.1 4,437,143 + Psyr_3728 0.11 -0.7 4,437,171 + Psyr_3728 0.19 -1.7 4,437,171 + Psyr_3728 0.19 -1.3 4,437,171 + Psyr_3728 0.19 +0.1 4,437,269 + Psyr_3728 0.45 -1.4 4,437,269 + Psyr_3728 0.45 +0.4 4,437,270 - Psyr_3728 0.46 -1.7 4,437,273 + Psyr_3728 0.46 -0.1 4,437,273 + Psyr_3728 0.46 +0.3 4,437,274 - Psyr_3728 0.47 +1.9 4,437,274 - Psyr_3728 0.47 -0.4 4,437,276 + Psyr_3728 0.47 -0.0 4,437,276 + Psyr_3728 0.47 -1.9 4,437,277 - Psyr_3728 0.47 -0.9 4,437,277 - Psyr_3728 0.47 +2.1 4,437,280 + Psyr_3728 0.48 -0.4 4,437,280 + Psyr_3728 0.48 -0.3 4,437,281 - Psyr_3728 0.49 -1.4 4,437,365 + Psyr_3728 0.71 +0.9 4,437,365 + Psyr_3728 0.71 -0.6 4,437,503 + +2.4 4,437,540 + -1.7 4,437,540 + +0.0 4,437,541 - -1.2 4,437,554 + +0.3
Or see this region's nucleotide sequence