Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16750 and ABZR87_RS16755 are separated by 51 nucleotides ABZR87_RS16755 and ABZR87_RS16760 are separated by 239 nucleotides
ABZR87_RS16750: ABZR87_RS16750 - propionate catabolism operon regulatory protein PrpR, at 108,217 to 110,163
_RS16750
ABZR87_RS16755: ABZR87_RS16755 - HD-GYP domain-containing protein, at 110,215 to 110,982
_RS16755
ABZR87_RS16760: ABZR87_RS16760 - GGDEF domain-containing protein, at 111,222 to 112,568
_RS16760
Position (kb) 110
111 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4 at 109.233 kb on + strand, within ABZR87_RS16750 at 109.234 kb on - strand, within ABZR87_RS16750 at 109.234 kb on - strand, within ABZR87_RS16750 at 109.415 kb on - strand, within ABZR87_RS16750 at 109.602 kb on + strand, within ABZR87_RS16750 at 109.603 kb on - strand, within ABZR87_RS16750 at 109.675 kb on + strand, within ABZR87_RS16750 at 109.676 kb on - strand, within ABZR87_RS16750 at 109.790 kb on + strand, within ABZR87_RS16750 at 109.791 kb on - strand, within ABZR87_RS16750 at 109.791 kb on - strand, within ABZR87_RS16750 at 109.791 kb on - strand, within ABZR87_RS16750 at 109.861 kb on + strand, within ABZR87_RS16750 at 109.862 kb on - strand, within ABZR87_RS16750 at 109.927 kb on + strand, within ABZR87_RS16750 at 109.927 kb on + strand, within ABZR87_RS16750 at 109.928 kb on - strand, within ABZR87_RS16750 at 109.928 kb on - strand, within ABZR87_RS16750 at 109.928 kb on - strand, within ABZR87_RS16750 at 110.161 kb on + strand at 110.161 kb on + strand at 110.161 kb on + strand at 110.161 kb on + strand at 110.212 kb on - strand at 110.212 kb on - strand at 110.212 kb on - strand at 110.212 kb on - strand at 110.398 kb on + strand, within ABZR87_RS16755 at 110.446 kb on + strand, within ABZR87_RS16755 at 110.447 kb on - strand, within ABZR87_RS16755 at 110.447 kb on - strand, within ABZR87_RS16755 at 110.447 kb on - strand, within ABZR87_RS16755 at 110.447 kb on - strand, within ABZR87_RS16755 at 110.447 kb on - strand, within ABZR87_RS16755 at 110.529 kb on - strand, within ABZR87_RS16755 at 110.529 kb on - strand, within ABZR87_RS16755 at 110.562 kb on - strand, within ABZR87_RS16755 at 110.891 kb on + strand, within ABZR87_RS16755 at 110.891 kb on + strand, within ABZR87_RS16755 at 110.892 kb on - strand, within ABZR87_RS16755 at 110.899 kb on + strand, within ABZR87_RS16755 at 110.967 kb on + strand at 110.967 kb on + strand at 110.967 kb on + strand at 110.968 kb on - strand at 110.968 kb on - strand at 110.968 kb on - strand at 111.141 kb on + strand at 111.141 kb on + strand at 111.141 kb on + strand at 111.142 kb on - strand at 111.142 kb on - strand at 111.142 kb on - strand at 111.213 kb on + strand at 111.213 kb on + strand at 111.214 kb on - strand at 111.214 kb on - strand at 111.214 kb on - strand at 111.214 kb on - strand at 111.214 kb on - strand at 111.214 kb on - strand at 111.214 kb on - strand at 111.318 kb on + strand at 111.318 kb on + strand at 111.319 kb on - strand at 111.319 kb on - strand at 111.319 kb on - strand at 111.321 kb on + strand at 111.382 kb on + strand, within ABZR87_RS16760 at 111.382 kb on + strand, within ABZR87_RS16760 at 111.382 kb on + strand, within ABZR87_RS16760 at 111.382 kb on + strand, within ABZR87_RS16760
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 109,233 + ABZR87_RS16750 0.52 -4.1 109,234 - ABZR87_RS16750 0.52 -3.7 109,234 - ABZR87_RS16750 0.52 -2.2 109,415 - ABZR87_RS16750 0.62 -2.8 109,602 + ABZR87_RS16750 0.71 -2.6 109,603 - ABZR87_RS16750 0.71 -0.6 109,675 + ABZR87_RS16750 0.75 -4.4 109,676 - ABZR87_RS16750 0.75 -4.5 109,790 + ABZR87_RS16750 0.81 -0.6 109,791 - ABZR87_RS16750 0.81 -2.0 109,791 - ABZR87_RS16750 0.81 -3.0 109,791 - ABZR87_RS16750 0.81 -4.8 109,861 + ABZR87_RS16750 0.84 -4.2 109,862 - ABZR87_RS16750 0.84 -3.6 109,927 + ABZR87_RS16750 0.88 -2.2 109,927 + ABZR87_RS16750 0.88 -4.4 109,928 - ABZR87_RS16750 0.88 -5.2 109,928 - ABZR87_RS16750 0.88 -3.9 109,928 - ABZR87_RS16750 0.88 -4.2 110,161 + -0.6 110,161 + -0.7 110,161 + +0.1 110,161 + -1.0 110,212 - +4.3 110,212 - +0.6 110,212 - -2.1 110,212 - +1.3 110,398 + ABZR87_RS16755 0.24 -0.1 110,446 + ABZR87_RS16755 0.30 -0.1 110,447 - ABZR87_RS16755 0.30 +0.6 110,447 - ABZR87_RS16755 0.30 +1.3 110,447 - ABZR87_RS16755 0.30 -0.4 110,447 - ABZR87_RS16755 0.30 +0.9 110,447 - ABZR87_RS16755 0.30 +0.1 110,529 - ABZR87_RS16755 0.41 -1.8 110,529 - ABZR87_RS16755 0.41 +0.3 110,562 - ABZR87_RS16755 0.45 -0.1 110,891 + ABZR87_RS16755 0.88 -0.3 110,891 + ABZR87_RS16755 0.88 +0.5 110,892 - ABZR87_RS16755 0.88 +1.2 110,899 + ABZR87_RS16755 0.89 +0.8 110,967 + +0.2 110,967 + -0.8 110,967 + -0.8 110,968 - -1.2 110,968 - +0.5 110,968 - -0.3 111,141 + -0.3 111,141 + +0.7 111,141 + +0.5 111,142 - -0.6 111,142 - +0.3 111,142 - +0.2 111,213 + +0.9 111,213 + +0.6 111,214 - +0.4 111,214 - +0.3 111,214 - +0.3 111,214 - +0.6 111,214 - +0.4 111,214 - +0.8 111,214 - +0.3 111,318 + +1.2 111,318 + -0.3 111,319 - -2.2 111,319 - +0.2 111,319 - +0.1 111,321 + +0.4 111,382 + ABZR87_RS16760 0.12 -1.3 111,382 + ABZR87_RS16760 0.12 +0.9 111,382 + ABZR87_RS16760 0.12 +0.4 111,382 + ABZR87_RS16760 0.12 -0.1
Or see this region's nucleotide sequence