Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16555 and ABZR87_RS16560 overlap by 4 nucleotides ABZR87_RS16560 and ABZR87_RS16565 are separated by 19 nucleotides ABZR87_RS16565 and ABZR87_RS16570 are separated by 143 nucleotides ABZR87_RS16570 and ABZR87_RS16575 are separated by 46 nucleotides ABZR87_RS16575 and ABZR87_RS16580 are separated by 2 nucleotides
ABZR87_RS16555: ABZR87_RS16555 - AMP-binding protein, at 64,021 to 65,637
_RS16555
ABZR87_RS16560: ABZR87_RS16560 - thioesterase family protein, at 65,634 to 66,062
_RS16560
ABZR87_RS16565: ABZR87_RS16565 - RidA family protein, at 66,082 to 66,474
_RS16565
ABZR87_RS16570: ABZR87_RS16570 - VOC family protein, at 66,618 to 67,469
_RS16570
ABZR87_RS16575: ABZR87_RS16575 - ABC transporter ATP-binding protein, at 67,516 to 68,268
_RS16575
ABZR87_RS16580: ABZR87_RS16580 - ABC transporter ATP-binding protein, at 68,271 to 69,125
_RS16580
Position (kb) 66
67
68 Strain fitness (log2 ratio) -2
-1
0
1
2 at 65.643 kb on + strand at 65.644 kb on - strand at 65.775 kb on + strand, within ABZR87_RS16560 at 65.776 kb on - strand, within ABZR87_RS16560 at 65.885 kb on - strand, within ABZR87_RS16560 at 65.885 kb on - strand, within ABZR87_RS16560 at 65.885 kb on - strand, within ABZR87_RS16560 at 65.975 kb on + strand, within ABZR87_RS16560 at 65.988 kb on - strand, within ABZR87_RS16560 at 65.988 kb on - strand, within ABZR87_RS16560 at 65.988 kb on - strand, within ABZR87_RS16560 at 66.060 kb on + strand at 66.510 kb on + strand at 66.519 kb on - strand at 66.519 kb on - strand at 66.680 kb on - strand at 66.780 kb on - strand, within ABZR87_RS16570 at 67.002 kb on + strand, within ABZR87_RS16570 at 67.003 kb on - strand, within ABZR87_RS16570 at 67.166 kb on - strand, within ABZR87_RS16570 at 67.237 kb on + strand, within ABZR87_RS16570 at 67.237 kb on + strand, within ABZR87_RS16570 at 67.237 kb on + strand, within ABZR87_RS16570 at 67.238 kb on - strand, within ABZR87_RS16570 at 67.238 kb on - strand, within ABZR87_RS16570 at 67.315 kb on + strand, within ABZR87_RS16570 at 67.315 kb on + strand, within ABZR87_RS16570 at 67.405 kb on + strand at 67.405 kb on + strand at 67.406 kb on - strand at 67.539 kb on - strand at 67.539 kb on - strand at 67.539 kb on - strand at 67.596 kb on + strand, within ABZR87_RS16575 at 67.597 kb on - strand, within ABZR87_RS16575 at 67.597 kb on - strand, within ABZR87_RS16575 at 67.597 kb on - strand, within ABZR87_RS16575 at 67.616 kb on + strand, within ABZR87_RS16575 at 67.616 kb on + strand, within ABZR87_RS16575 at 67.616 kb on + strand, within ABZR87_RS16575 at 67.616 kb on + strand, within ABZR87_RS16575 at 67.617 kb on - strand, within ABZR87_RS16575 at 67.724 kb on + strand, within ABZR87_RS16575 at 67.725 kb on - strand, within ABZR87_RS16575 at 67.889 kb on + strand, within ABZR87_RS16575 at 67.889 kb on + strand, within ABZR87_RS16575 at 67.889 kb on + strand, within ABZR87_RS16575 at 68.101 kb on - strand, within ABZR87_RS16575 at 68.101 kb on - strand, within ABZR87_RS16575 at 68.101 kb on - strand, within ABZR87_RS16575 at 68.208 kb on - strand at 68.338 kb on + strand at 68.338 kb on + strand at 68.338 kb on + strand at 68.339 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 65,643 + -0.6 65,644 - +1.8 65,775 + ABZR87_RS16560 0.33 +0.5 65,776 - ABZR87_RS16560 0.33 +0.5 65,885 - ABZR87_RS16560 0.59 +1.2 65,885 - ABZR87_RS16560 0.59 +1.4 65,885 - ABZR87_RS16560 0.59 +1.1 65,975 + ABZR87_RS16560 0.79 +0.0 65,988 - ABZR87_RS16560 0.83 +2.2 65,988 - ABZR87_RS16560 0.83 +1.8 65,988 - ABZR87_RS16560 0.83 +2.1 66,060 + -0.1 66,510 + -0.3 66,519 - +0.3 66,519 - -0.4 66,680 - +1.4 66,780 - ABZR87_RS16570 0.19 +1.6 67,002 + ABZR87_RS16570 0.45 -0.3 67,003 - ABZR87_RS16570 0.45 -0.0 67,166 - ABZR87_RS16570 0.64 +0.1 67,237 + ABZR87_RS16570 0.73 +0.4 67,237 + ABZR87_RS16570 0.73 -0.1 67,237 + ABZR87_RS16570 0.73 -0.1 67,238 - ABZR87_RS16570 0.73 -0.4 67,238 - ABZR87_RS16570 0.73 +0.4 67,315 + ABZR87_RS16570 0.82 +0.4 67,315 + ABZR87_RS16570 0.82 +1.2 67,405 + -1.8 67,405 + -1.0 67,406 - +0.1 67,539 - +0.0 67,539 - -0.7 67,539 - -0.0 67,596 + ABZR87_RS16575 0.11 +0.1 67,597 - ABZR87_RS16575 0.11 -0.1 67,597 - ABZR87_RS16575 0.11 +0.5 67,597 - ABZR87_RS16575 0.11 +0.1 67,616 + ABZR87_RS16575 0.13 +0.0 67,616 + ABZR87_RS16575 0.13 +1.0 67,616 + ABZR87_RS16575 0.13 -0.5 67,616 + ABZR87_RS16575 0.13 -0.3 67,617 - ABZR87_RS16575 0.13 -0.1 67,724 + ABZR87_RS16575 0.28 -0.1 67,725 - ABZR87_RS16575 0.28 -1.0 67,889 + ABZR87_RS16575 0.50 -0.8 67,889 + ABZR87_RS16575 0.50 -0.4 67,889 + ABZR87_RS16575 0.50 -0.5 68,101 - ABZR87_RS16575 0.78 +0.9 68,101 - ABZR87_RS16575 0.78 -0.4 68,101 - ABZR87_RS16575 0.78 +0.3 68,208 - +0.3 68,338 + +0.3 68,338 + -0.2 68,338 + -0.6 68,339 - -0.2
Or see this region's nucleotide sequence