Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS16520 and ABZR87_RS16525 are separated by 27 nucleotides ABZR87_RS16525 and ABZR87_RS16530 are separated by 136 nucleotides ABZR87_RS16530 and ABZR87_RS16535 are separated by 1 nucleotides ABZR87_RS16535 and ABZR87_RS16540 overlap by 4 nucleotides
ABZR87_RS16520: ABZR87_RS16520 - tautomerase family protein, at 56,753 to 57,205
_RS16520
ABZR87_RS16525: ABZR87_RS16525 - dienelactone hydrolase family protein, at 57,233 to 58,048
_RS16525
ABZR87_RS16530: ABZR87_RS16530 - bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase, at 58,185 to 60,563
_RS16530
ABZR87_RS16535: ABZR87_RS16535 - SDR family NAD(P)-dependent oxidoreductase, at 60,565 to 61,347
_RS16535
ABZR87_RS16540: ABZR87_RS16540 - MarR family transcriptional regulator, at 61,344 to 61,928
_RS16540
Position (kb) 58
59
60
61 Strain fitness (log2 ratio) -1
0
1 at 57.320 kb on + strand, within ABZR87_RS16525 at 57.320 kb on + strand, within ABZR87_RS16525 at 57.320 kb on + strand, within ABZR87_RS16525 at 57.320 kb on + strand, within ABZR87_RS16525 at 57.320 kb on + strand, within ABZR87_RS16525 at 57.321 kb on - strand, within ABZR87_RS16525 at 57.321 kb on - strand, within ABZR87_RS16525 at 57.321 kb on - strand, within ABZR87_RS16525 at 57.321 kb on - strand, within ABZR87_RS16525 at 57.345 kb on + strand, within ABZR87_RS16525 at 57.345 kb on + strand, within ABZR87_RS16525 at 57.428 kb on + strand, within ABZR87_RS16525 at 57.428 kb on + strand, within ABZR87_RS16525 at 57.428 kb on + strand, within ABZR87_RS16525 at 57.428 kb on + strand, within ABZR87_RS16525 at 57.428 kb on + strand, within ABZR87_RS16525 at 57.429 kb on - strand, within ABZR87_RS16525 at 57.429 kb on - strand, within ABZR87_RS16525 at 57.429 kb on - strand, within ABZR87_RS16525 at 57.800 kb on + strand, within ABZR87_RS16525 at 57.848 kb on + strand, within ABZR87_RS16525 at 57.848 kb on + strand, within ABZR87_RS16525 at 58.150 kb on + strand at 58.199 kb on + strand at 58.199 kb on + strand at 58.199 kb on + strand at 58.199 kb on + strand at 58.200 kb on - strand at 58.224 kb on + strand at 58.225 kb on - strand at 58.225 kb on - strand at 58.293 kb on + strand at 58.483 kb on + strand, within ABZR87_RS16530 at 58.483 kb on + strand, within ABZR87_RS16530 at 58.484 kb on - strand, within ABZR87_RS16530 at 58.484 kb on - strand, within ABZR87_RS16530 at 58.484 kb on - strand, within ABZR87_RS16530 at 58.484 kb on - strand, within ABZR87_RS16530 at 58.484 kb on - strand, within ABZR87_RS16530 at 58.635 kb on + strand, within ABZR87_RS16530 at 58.644 kb on - strand, within ABZR87_RS16530 at 58.644 kb on - strand, within ABZR87_RS16530 at 58.647 kb on + strand, within ABZR87_RS16530 at 58.647 kb on + strand, within ABZR87_RS16530 at 58.647 kb on + strand, within ABZR87_RS16530 at 58.647 kb on + strand, within ABZR87_RS16530 at 58.648 kb on - strand, within ABZR87_RS16530 at 58.648 kb on - strand, within ABZR87_RS16530 at 58.648 kb on - strand, within ABZR87_RS16530 at 58.648 kb on - strand, within ABZR87_RS16530 at 58.648 kb on - strand, within ABZR87_RS16530 at 58.768 kb on - strand, within ABZR87_RS16530 at 58.893 kb on + strand, within ABZR87_RS16530 at 58.893 kb on + strand, within ABZR87_RS16530 at 58.893 kb on + strand, within ABZR87_RS16530 at 58.893 kb on + strand, within ABZR87_RS16530 at 58.894 kb on - strand, within ABZR87_RS16530 at 58.894 kb on - strand, within ABZR87_RS16530 at 58.991 kb on + strand, within ABZR87_RS16530 at 58.991 kb on + strand, within ABZR87_RS16530 at 58.992 kb on - strand, within ABZR87_RS16530 at 58.992 kb on - strand, within ABZR87_RS16530 at 59.151 kb on + strand, within ABZR87_RS16530 at 59.151 kb on + strand, within ABZR87_RS16530 at 59.235 kb on + strand, within ABZR87_RS16530 at 59.265 kb on + strand, within ABZR87_RS16530 at 59.328 kb on + strand, within ABZR87_RS16530 at 59.329 kb on - strand, within ABZR87_RS16530 at 59.329 kb on - strand, within ABZR87_RS16530 at 59.476 kb on - strand, within ABZR87_RS16530 at 59.476 kb on - strand, within ABZR87_RS16530 at 59.806 kb on - strand, within ABZR87_RS16530 at 60.225 kb on + strand, within ABZR87_RS16530 at 60.225 kb on + strand, within ABZR87_RS16530 at 60.450 kb on + strand at 61.021 kb on + strand, within ABZR87_RS16535 at 61.021 kb on + strand, within ABZR87_RS16535 at 61.021 kb on + strand, within ABZR87_RS16535 at 61.022 kb on - strand, within ABZR87_RS16535 at 61.022 kb on - strand, within ABZR87_RS16535 at 61.022 kb on - strand, within ABZR87_RS16535 at 61.022 kb on - strand, within ABZR87_RS16535 at 61.022 kb on - strand, within ABZR87_RS16535 at 61.022 kb on - strand, within ABZR87_RS16535 at 61.034 kb on - strand, within ABZR87_RS16535 at 61.034 kb on - strand, within ABZR87_RS16535 at 61.034 kb on - strand, within ABZR87_RS16535 at 61.034 kb on - strand, within ABZR87_RS16535 at 61.130 kb on - strand, within ABZR87_RS16535 at 61.132 kb on - strand, within ABZR87_RS16535
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 57,320 + ABZR87_RS16525 0.11 +0.9 57,320 + ABZR87_RS16525 0.11 -0.1 57,320 + ABZR87_RS16525 0.11 -0.0 57,320 + ABZR87_RS16525 0.11 +1.1 57,320 + ABZR87_RS16525 0.11 +0.1 57,321 - ABZR87_RS16525 0.11 +0.4 57,321 - ABZR87_RS16525 0.11 -1.0 57,321 - ABZR87_RS16525 0.11 +0.3 57,321 - ABZR87_RS16525 0.11 -1.1 57,345 + ABZR87_RS16525 0.14 +1.0 57,345 + ABZR87_RS16525 0.14 +0.6 57,428 + ABZR87_RS16525 0.24 +1.0 57,428 + ABZR87_RS16525 0.24 +0.0 57,428 + ABZR87_RS16525 0.24 +1.6 57,428 + ABZR87_RS16525 0.24 +0.8 57,428 + ABZR87_RS16525 0.24 +0.7 57,429 - ABZR87_RS16525 0.24 +0.9 57,429 - ABZR87_RS16525 0.24 -0.6 57,429 - ABZR87_RS16525 0.24 +0.0 57,800 + ABZR87_RS16525 0.69 -0.0 57,848 + ABZR87_RS16525 0.75 +1.0 57,848 + ABZR87_RS16525 0.75 +0.3 58,150 + +1.3 58,199 + +0.0 58,199 + +0.0 58,199 + -0.4 58,199 + -1.4 58,200 - -0.8 58,224 + -1.7 58,225 - +0.4 58,225 - -0.9 58,293 + +1.0 58,483 + ABZR87_RS16530 0.13 -0.7 58,483 + ABZR87_RS16530 0.13 +0.5 58,484 - ABZR87_RS16530 0.13 -0.8 58,484 - ABZR87_RS16530 0.13 +0.1 58,484 - ABZR87_RS16530 0.13 -0.2 58,484 - ABZR87_RS16530 0.13 +0.4 58,484 - ABZR87_RS16530 0.13 +0.1 58,635 + ABZR87_RS16530 0.19 +0.2 58,644 - ABZR87_RS16530 0.19 -0.1 58,644 - ABZR87_RS16530 0.19 -0.0 58,647 + ABZR87_RS16530 0.19 -0.4 58,647 + ABZR87_RS16530 0.19 -1.6 58,647 + ABZR87_RS16530 0.19 +0.5 58,647 + ABZR87_RS16530 0.19 -0.4 58,648 - ABZR87_RS16530 0.19 -0.2 58,648 - ABZR87_RS16530 0.19 +0.0 58,648 - ABZR87_RS16530 0.19 +0.1 58,648 - ABZR87_RS16530 0.19 -1.2 58,648 - ABZR87_RS16530 0.19 -0.5 58,768 - ABZR87_RS16530 0.25 -0.5 58,893 + ABZR87_RS16530 0.30 -0.7 58,893 + ABZR87_RS16530 0.30 +0.5 58,893 + ABZR87_RS16530 0.30 -0.0 58,893 + ABZR87_RS16530 0.30 -0.7 58,894 - ABZR87_RS16530 0.30 +0.4 58,894 - ABZR87_RS16530 0.30 +0.8 58,991 + ABZR87_RS16530 0.34 -0.2 58,991 + ABZR87_RS16530 0.34 +1.1 58,992 - ABZR87_RS16530 0.34 -1.1 58,992 - ABZR87_RS16530 0.34 +0.3 59,151 + ABZR87_RS16530 0.41 +0.5 59,151 + ABZR87_RS16530 0.41 +0.4 59,235 + ABZR87_RS16530 0.44 -0.7 59,265 + ABZR87_RS16530 0.45 -0.5 59,328 + ABZR87_RS16530 0.48 -1.1 59,329 - ABZR87_RS16530 0.48 +1.0 59,329 - ABZR87_RS16530 0.48 -1.4 59,476 - ABZR87_RS16530 0.54 -1.0 59,476 - ABZR87_RS16530 0.54 +0.2 59,806 - ABZR87_RS16530 0.68 -0.5 60,225 + ABZR87_RS16530 0.86 -0.3 60,225 + ABZR87_RS16530 0.86 -0.3 60,450 + +0.3 61,021 + ABZR87_RS16535 0.58 +0.4 61,021 + ABZR87_RS16535 0.58 +1.6 61,021 + ABZR87_RS16535 0.58 +1.6 61,022 - ABZR87_RS16535 0.58 -0.9 61,022 - ABZR87_RS16535 0.58 -0.2 61,022 - ABZR87_RS16535 0.58 +0.2 61,022 - ABZR87_RS16535 0.58 +0.9 61,022 - ABZR87_RS16535 0.58 -1.1 61,022 - ABZR87_RS16535 0.58 -0.7 61,034 - ABZR87_RS16535 0.60 +0.8 61,034 - ABZR87_RS16535 0.60 +0.5 61,034 - ABZR87_RS16535 0.60 -0.2 61,034 - ABZR87_RS16535 0.60 +0.0 61,130 - ABZR87_RS16535 0.72 +0.2 61,132 - ABZR87_RS16535 0.72 -1.1
Or see this region's nucleotide sequence