Experiment: Heptanoic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS13450 and ABZR87_RS13455 are separated by 114 nucleotides ABZR87_RS13455 and ABZR87_RS13460 are separated by 58 nucleotides ABZR87_RS13460 and ABZR87_RS13465 are separated by 105 nucleotides
ABZR87_RS13450: ABZR87_RS13450 - hypothetical protein, at 2,847,595 to 2,848,155
_RS13450
ABZR87_RS13455: ABZR87_RS13455 - dihydrolipoyl dehydrogenase, at 2,848,270 to 2,850,051
_RS13455
ABZR87_RS13460: ABZR87_RS13460 - MFS transporter, at 2,850,110 to 2,850,682
_RS13460
ABZR87_RS13465: ABZR87_RS13465 - dihydrolipoyllysine-residue acetyltransferase, at 2,850,788 to 2,852,461
_RS13465
Position (kb)
2848
2849
2850
2851 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2847.270 kb on + strand at 2847.270 kb on + strand at 2847.411 kb on + strand at 2847.412 kb on - strand at 2847.412 kb on - strand at 2847.466 kb on + strand at 2847.466 kb on + strand at 2847.473 kb on - strand at 2847.564 kb on + strand at 2847.565 kb on - strand at 2847.587 kb on + strand at 2847.666 kb on + strand, within ABZR87_RS13450 at 2847.823 kb on + strand, within ABZR87_RS13450 at 2847.823 kb on + strand, within ABZR87_RS13450 at 2847.823 kb on + strand, within ABZR87_RS13450 at 2847.824 kb on - strand, within ABZR87_RS13450 at 2847.824 kb on - strand, within ABZR87_RS13450 at 2847.824 kb on - strand, within ABZR87_RS13450 at 2847.824 kb on - strand, within ABZR87_RS13450 at 2847.824 kb on - strand, within ABZR87_RS13450 at 2847.824 kb on - strand, within ABZR87_RS13450 at 2847.824 kb on - strand, within ABZR87_RS13450 at 2847.824 kb on - strand, within ABZR87_RS13450 at 2847.889 kb on - strand, within ABZR87_RS13450 at 2847.910 kb on + strand, within ABZR87_RS13450 at 2847.910 kb on + strand, within ABZR87_RS13450 at 2847.911 kb on - strand, within ABZR87_RS13450 at 2847.911 kb on - strand, within ABZR87_RS13450 at 2847.911 kb on - strand, within ABZR87_RS13450 at 2847.920 kb on + strand, within ABZR87_RS13450 at 2847.920 kb on + strand, within ABZR87_RS13450 at 2847.936 kb on + strand, within ABZR87_RS13450 at 2847.936 kb on + strand, within ABZR87_RS13450 at 2847.936 kb on + strand, within ABZR87_RS13450 at 2847.936 kb on + strand, within ABZR87_RS13450 at 2847.936 kb on + strand, within ABZR87_RS13450 at 2847.936 kb on + strand, within ABZR87_RS13450 at 2847.937 kb on - strand, within ABZR87_RS13450 at 2847.937 kb on - strand, within ABZR87_RS13450 at 2847.937 kb on - strand, within ABZR87_RS13450 at 2847.937 kb on - strand, within ABZR87_RS13450 at 2847.937 kb on - strand, within ABZR87_RS13450 at 2847.937 kb on - strand, within ABZR87_RS13450 at 2847.937 kb on - strand, within ABZR87_RS13450 at 2847.937 kb on - strand, within ABZR87_RS13450 at 2847.937 kb on - strand, within ABZR87_RS13450 at 2847.949 kb on + strand, within ABZR87_RS13450 at 2847.949 kb on + strand, within ABZR87_RS13450 at 2847.949 kb on + strand, within ABZR87_RS13450 at 2847.949 kb on + strand, within ABZR87_RS13450 at 2848.037 kb on + strand, within ABZR87_RS13450 at 2848.246 kb on + strand at 2848.246 kb on + strand at 2848.247 kb on - strand at 2848.278 kb on + strand at 2850.228 kb on + strand, within ABZR87_RS13460 at 2850.229 kb on - strand, within ABZR87_RS13460 at 2850.316 kb on - strand, within ABZR87_RS13460 at 2850.325 kb on - strand, within ABZR87_RS13460 at 2850.325 kb on - strand, within ABZR87_RS13460 at 2850.372 kb on + strand, within ABZR87_RS13460 at 2850.608 kb on - strand, within ABZR87_RS13460 at 2850.608 kb on - strand, within ABZR87_RS13460 at 2850.608 kb on - strand, within ABZR87_RS13460
Per-strain Table
Position Strand Gene LocusTag Fraction Heptanoic (C) remove 2,847,270 + -0.6 2,847,270 + -1.2 2,847,411 + -2.2 2,847,412 - +0.7 2,847,412 - +0.5 2,847,466 + -1.1 2,847,466 + +0.2 2,847,473 - -0.0 2,847,564 + +1.4 2,847,565 - +0.0 2,847,587 + -1.0 2,847,666 + ABZR87_RS13450 0.13 -0.5 2,847,823 + ABZR87_RS13450 0.41 -0.7 2,847,823 + ABZR87_RS13450 0.41 -0.5 2,847,823 + ABZR87_RS13450 0.41 -0.3 2,847,824 - ABZR87_RS13450 0.41 +2.3 2,847,824 - ABZR87_RS13450 0.41 -0.9 2,847,824 - ABZR87_RS13450 0.41 -0.2 2,847,824 - ABZR87_RS13450 0.41 +0.2 2,847,824 - ABZR87_RS13450 0.41 +0.3 2,847,824 - ABZR87_RS13450 0.41 +0.9 2,847,824 - ABZR87_RS13450 0.41 -1.0 2,847,824 - ABZR87_RS13450 0.41 +0.9 2,847,889 - ABZR87_RS13450 0.52 -0.1 2,847,910 + ABZR87_RS13450 0.56 +1.3 2,847,910 + ABZR87_RS13450 0.56 -1.2 2,847,911 - ABZR87_RS13450 0.56 +0.8 2,847,911 - ABZR87_RS13450 0.56 +0.2 2,847,911 - ABZR87_RS13450 0.56 +0.2 2,847,920 + ABZR87_RS13450 0.58 -0.4 2,847,920 + ABZR87_RS13450 0.58 -1.6 2,847,936 + ABZR87_RS13450 0.61 -0.4 2,847,936 + ABZR87_RS13450 0.61 -0.9 2,847,936 + ABZR87_RS13450 0.61 +1.5 2,847,936 + ABZR87_RS13450 0.61 -0.3 2,847,936 + ABZR87_RS13450 0.61 -0.9 2,847,936 + ABZR87_RS13450 0.61 -0.3 2,847,937 - ABZR87_RS13450 0.61 -0.8 2,847,937 - ABZR87_RS13450 0.61 -0.8 2,847,937 - ABZR87_RS13450 0.61 +1.0 2,847,937 - ABZR87_RS13450 0.61 -0.4 2,847,937 - ABZR87_RS13450 0.61 +0.6 2,847,937 - ABZR87_RS13450 0.61 +1.4 2,847,937 - ABZR87_RS13450 0.61 +0.0 2,847,937 - ABZR87_RS13450 0.61 +0.3 2,847,937 - ABZR87_RS13450 0.61 -0.7 2,847,949 + ABZR87_RS13450 0.63 +0.8 2,847,949 + ABZR87_RS13450 0.63 -0.1 2,847,949 + ABZR87_RS13450 0.63 +0.0 2,847,949 + ABZR87_RS13450 0.63 -0.0 2,848,037 + ABZR87_RS13450 0.79 -0.2 2,848,246 + +0.5 2,848,246 + -0.6 2,848,247 - +0.8 2,848,278 + -0.8 2,850,228 + ABZR87_RS13460 0.21 -2.3 2,850,229 - ABZR87_RS13460 0.21 -0.7 2,850,316 - ABZR87_RS13460 0.36 -0.2 2,850,325 - ABZR87_RS13460 0.38 -1.6 2,850,325 - ABZR87_RS13460 0.38 -1.3 2,850,372 + ABZR87_RS13460 0.46 -1.9 2,850,608 - ABZR87_RS13460 0.87 -1.4 2,850,608 - ABZR87_RS13460 0.87 -2.8 2,850,608 - ABZR87_RS13460 0.87 -0.6
Or see this region's nucleotide sequence